Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS09645 and LRK53_RS09650 are separated by 93 nucleotidesLRK53_RS09650 and LRK53_RS09655 are separated by 257 nucleotidesLRK53_RS09655 and LRK53_RS09660 overlap by 4 nucleotidesLRK53_RS09660 and LRK53_RS09665 overlap by 4 nucleotides LRK53_RS09645: LRK53_RS09645 - MFS transporter, at 2,172,718 to 2,174,016 _RS09645 LRK53_RS09650: LRK53_RS09650 - tRNA-Leu, at 2,174,110 to 2,174,196 _RS09650 LRK53_RS09655: LRK53_RS09655 - ribonuclease R, at 2,174,454 to 2,177,024 _RS09655 LRK53_RS09660: LRK53_RS09660 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 2,177,021 to 2,177,767 _RS09660 LRK53_RS09665: LRK53_RS09665 - hypothetical protein, at 2,177,764 to 2,178,033 _RS09665
Group Condition LRK53_RS09645 LRK53_RS09650 LRK53_RS09655 LRK53_RS09660 LRK53_RS09665
biofilm assay; biofilm sample Biofilm; Day4; SGW; pH7 +0.0 N.D. +0.0 -3.7 -0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.0 N.D. -0.4 -2.6 -1.2
stress R2A_PIPES with Cobalt chloride 1024 uM +0.1 N.D. -1.1 -1.5 -0.6
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.0 N.D. -1.1 -1.7 -0.4
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.2 N.D. -0.9 -1.6 -0.8
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM -0.0 N.D. -1.1 -1.5 -0.4
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.0 N.D. -1.1 -0.9 -1.1
pH pH4.8 +0.1 N.D. -1.1 -1.6 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 N.D. -0.3 -2.3 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.3 N.D. -0.1 -2.3 +0.1
stress R2A_PIPES with Aluminum chloride 0.5625 mM +0.1 N.D. -0.9 -1.5 -0.3
stress R2A_PIPES with Cobalt chloride 512 uM -0.1 N.D. -1.0 -0.8 -0.7
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 N.D. -0.5 -2.4 +0.4
nldm low iron NLDM_defined low iron; midlog +0.0 N.D. -0.3 -2.3 +0.1
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM -0.1 N.D. -0.9 -1.0 -0.4
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM +0.1 N.D. -1.0 -0.9 -0.3
stress R2A_PIPES with Zinc chloride 5120 uM +0.1 N.D. -0.8 -0.8 -0.7
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.1 N.D. -0.1 -2.1 +0.0
pH pH4.5 -0.1 N.D. -0.8 -0.9 -0.4
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -0.3 N.D. +0.1 -2.6 +0.7
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.1 N.D. +0.2 -2.2 +0.0
nutrient defined media with D-Glucose +0.0 N.D. -0.2 -1.7 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.0 N.D. -0.3 -1.8 +0.1
nutrient defined media with L-Serine +0.1 N.D. -0.2 -1.7 -0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.1 N.D. +0.4 -2.4 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.0 N.D. +0.2 -1.8 +0.3
pH pH5 -0.1 N.D. -1.1 +1.1 -0.3
pH pH5 +0.1 N.D. -1.3 +1.0 +0.0
pH pH4.5 +0.0 N.D. -0.8 +1.1 -0.4
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM +0.1 N.D. -0.8 +1.0 -0.2
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