Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS08710 and LRK53_RS08715 overlap by 8 nucleotidesLRK53_RS08715 and LRK53_RS08720 overlap by 8 nucleotidesLRK53_RS08720 and LRK53_RS08725 are separated by 48 nucleotidesLRK53_RS08725 and LRK53_RS08730 overlap by 8 nucleotides LRK53_RS08710: LRK53_RS08710 - hypothetical protein, at 1,957,296 to 1,958,159 _RS08710 LRK53_RS08715: LRK53_RS08715 - hydantoinase B/oxoprolinase family protein, at 1,958,152 to 1,959,822 _RS08715 LRK53_RS08720: LRK53_RS08720 - hydantoinase/oxoprolinase family protein, at 1,959,815 to 1,961,911 _RS08720 LRK53_RS08725: LRK53_RS08725 - TonB-dependent receptor, at 1,961,960 to 1,964,194 _RS08725 LRK53_RS08730: LRK53_RS08730 - hypothetical protein, at 1,964,187 to 1,964,531 _RS08730
Group Condition LRK53_RS08710 LRK53_RS08715 LRK53_RS08720 LRK53_RS08725 LRK53_RS08730
pH pH4.8 -0.1 -0.2 +0.2 +0.0 -1.4
biofilm assay; biofilm sample Biofilm; Day2; SGW; pH7 -0.1 -0.1 +0.0 +0.1 -1.4
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.1 -0.1 -0.0 +0.0 -1.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 -0.0 +0.1 +0.2 -1.3
nldm low p NLDM_defined low phosphorus; midlog -0.1 -0.1 +0.0 +0.1 -0.9
nldm control NLDM_defined; midlog +0.2 -0.0 -0.2 +0.0 -0.8
stress R2A_PIPES with Cobalt chloride 1024 uM +0.1 -0.0 -0.1 +0.0 -0.7
no stress control R2A_PIPES no stress control -0.1 +0.0 +0.1 +0.1 -0.9
nutrient defined media with 20AA_mix -0.3 -0.0 +0.3 +0.1 -0.7
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.1 -0.3 +0.2 -0.1 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.3 -0.3 +0.1 +0.2 -0.2
stress R2A_PIPES with Cobalt chloride 512 uM -0.2 +0.0 +0.3 +0.0 -0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.4 -0.3 +0.1 +0.1 -0.8
nldm control NLDM_defined; midlog +0.2 -0.1 +0.2 -0.0 -0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM +0.1 +0.1 +0.1 +0.1 -0.6
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM -0.3 -0.2 +0.3 +0.1 -0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM +0.2 -0.0 +0.3 +0.1 -0.8
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM +0.0 +0.1 +0.1 +0.2 -0.6
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 +0.0 +0.2 +0.3 +0.4
biofilm assay; planktonic sample planktonic; Day4; SGW; -0.4 +0.1 -0.1 +0.0 +1.0
stress R2A_PIPES with Cobalt chloride 512 uM -0.1 -0.1 +0.3 -0.0 +0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM -0.1 -0.1 +0.1 +0.0 +0.7
nldm low p NLDM_defined low phosphorus; midlog +0.1 +0.0 -0.0 -0.1 +0.7
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.3 -0.1 +0.1 +1.1
pH pH4.5 +0.1 -0.0 -0.1 +0.1 +0.7
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.1 +0.3 +0.4 -0.1 +0.3
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM +0.0 -0.2 +0.2 +0.2 +0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.1 +0.1 +0.2 +0.2 +0.6
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM +0.2 +0.1 +0.5 +0.1 +0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; +0.4 -0.0 +0.3 +0.2 +0.8
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