Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS07080 and LRK53_RS07085 are separated by 168 nucleotidesLRK53_RS07085 and LRK53_RS07090 are separated by 183 nucleotidesLRK53_RS07090 and LRK53_RS07095 are separated by 134 nucleotidesLRK53_RS07095 and LRK53_RS07100 are separated by 25 nucleotides LRK53_RS07080: LRK53_RS07080 - M20 family metallopeptidase, at 1,593,368 to 1,594,792 _RS07080 LRK53_RS07085: LRK53_RS07085 - YggS family pyridoxal phosphate-dependent enzyme, at 1,594,961 to 1,595,692 _RS07085 LRK53_RS07090: LRK53_RS07090 - C40 family peptidase, at 1,595,876 to 1,596,556 _RS07090 LRK53_RS07095: LRK53_RS07095 - rhomboid family intramembrane serine protease, at 1,596,691 to 1,597,308 _RS07095 LRK53_RS07100: LRK53_RS07100 - amino acid permease, at 1,597,334 to 1,598,689 _RS07100
Group Condition LRK53_RS07080 LRK53_RS07085 LRK53_RS07090 LRK53_RS07095 LRK53_RS07100
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.0 -0.9 N.D. -1.0 -0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -0.2 -1.6 N.D. -0.1 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.4 -0.9 N.D. -0.4 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 -1.3 N.D. -0.3 -0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -0.1 -1.9 N.D. -0.0 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.3 N.D. -0.0 -0.8
nldm control NLDM_defined; midlog +0.1 -0.6 N.D. -0.5 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 -0.8 N.D. +0.1 -0.4
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.2 -0.4 N.D. -0.3 -0.2
biofilm assay; biofilm sample Biofilm; Day2; SGW; pH7 +0.0 -0.7 N.D. -0.5 +0.1
biofilm assay; biofilm sample Biofilm; Day2; SGW; pH7 -0.1 -0.7 N.D. -0.1 -0.1
biofilm assay; planktonic sample planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 -0.4 N.D. -0.5 +0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.0 +0.3 N.D. -0.7 -0.4
stress R2A_PIPES with Zinc chloride 2560 uM +0.1 -0.9 N.D. -0.0 -0.1
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +0.2 -0.1 N.D. -0.7 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 +0.3 N.D. -0.6 -0.2
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +0.1 -0.7 N.D. -0.1 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.0 +0.8 N.D. -0.2 -1.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; +0.2 +0.4 N.D. -0.5 -0.4
stress R2A_PIPES with Cobalt chloride 1024 uM +0.3 -0.2 N.D. -0.6 +0.1
nutrient defined media with 20AA_mix +0.0 -0.2 N.D. +0.4 -0.6
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -0.2 -0.2 N.D. +0.8 -0.3
nldm low p NLDM_defined low phosphorus; midlog +0.1 +0.7 N.D. -0.5 -0.1
stress R2A_PIPES with Zinc chloride 5120 uM +0.2 +0.3 N.D. -0.4 +0.0
pH pH5 -0.0 +0.6 N.D. -0.3 -0.2
biofilm assay; biofilm sample Biofilm; Day4; SGW; Manganese (II) chloride tetrahydrate 10mM -0.1 +0.8 N.D. -0.5 -0.0
nutrient defined media with 20AA_mix +0.1 +0.4 N.D. +0.3 -0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.1 +1.0 N.D. -0.4 -0.1
nutrient defined media with L-Serine +0.0 +1.1 N.D. -0.1 +0.1
nutrient defined media with D-Glucose +0.1 +0.6 N.D. +0.5 +0.1
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