Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS04525 and LRK53_RS04530 are separated by 112 nucleotidesLRK53_RS04530 and LRK53_RS04535 are separated by 144 nucleotidesLRK53_RS04535 and LRK53_RS04540 are separated by 54 nucleotidesLRK53_RS04540 and LRK53_RS04545 are separated by 95 nucleotides LRK53_RS04525: LRK53_RS04525 - M48 family metallopeptidase, at 1,050,910 to 1,052,793 _RS04525 LRK53_RS04530: LRK53_RS04530 - choline dehydrogenase, at 1,052,906 to 1,054,504 _RS04530 LRK53_RS04535: LRK53_RS04535 - MFS transporter, at 1,054,649 to 1,055,881 _RS04535 LRK53_RS04540: LRK53_RS04540 - CBS domain-containing protein, at 1,055,936 to 1,056,364 _RS04540 LRK53_RS04545: LRK53_RS04545 - glycosyltransferase family 2 protein, at 1,056,460 to 1,057,398 _RS04545
Group Condition LRK53_RS04525 LRK53_RS04530 LRK53_RS04535 LRK53_RS04540 LRK53_RS04545
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -0.4 -0.2 -0.2 -0.8 -0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.3 -0.4 -0.0 -0.9 -0.3
stress R2A_PIPES with Cobalt chloride 512 uM -0.2 -0.1 -0.4 -0.8 +0.1
biofilm assay; planktonic sample planktonic; Day4; SGW; -0.1 -0.2 -0.3 -0.2 -0.4
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.2 -0.3 +0.1 -1.1 -0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.2 +0.1 -0.0 -0.8 -0.2
nutrient defined media with D-Glucose -0.5 -0.0 -0.2 -0.3 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.6 -0.2 +0.2 -0.1 -0.3
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.4 -0.1 -0.2 -0.2 +0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 +0.1 -0.2 -0.5 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 +0.0 -0.2 -0.4 -0.3
stress R2A_PIPES with Nickel (II) chloride 848 uM -0.3 -0.1 +0.1 +0.2 -0.4
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM +0.1 -0.2 -0.4 -0.2 +0.1
nutrient defined media with D-Glucose -0.5 -0.3 -0.2 +0.4 -0.0
biofilm assay; biofilm sample biofilm; Day4; SGW; Aluminum chloride 1mM -0.0 -0.1 -0.2 +0.4 -0.5
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -0.3 -0.2 +0.3 +0.1 -0.3
nldm control NLDM_defined; midlog +0.2 +0.0 -0.4 +0.1 -0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.2 +0.1 +0.2 -0.5 +0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.0 -0.1 -0.6 +0.5 -0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -0.5 +0.4 -0.3 +0.4 -0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.1 -0.4 -0.0 +0.5 +0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 +0.0 -0.3 -0.3 +0.2
nutrient defined media with 20AA_mix -0.3 -0.0 -0.1 +0.6 -0.2
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.4 -0.1 +0.1 +0.3 +0.1
nutrient defined media with 20AA_mix -0.0 +0.0 -0.4 +0.5 -0.1
stress R2A_PIPES with Zinc chloride 5120 uM -0.3 -0.1 -0.2 +0.6 +0.1
no stress control R2A_PIPES no stress control -0.0 -0.1 -0.2 +0.5 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.1 +0.2 +0.6 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; +0.0 +0.1 -0.2 +0.3 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 -0.0 -0.0 +0.9 +0.1
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