Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS04405 and LRK53_RS04410 overlap by 4 nucleotidesLRK53_RS04410 and LRK53_RS04415 are separated by 216 nucleotidesLRK53_RS04415 and LRK53_RS04420 are separated by 4 nucleotidesLRK53_RS04420 and LRK53_RS04425 are separated by 17 nucleotides LRK53_RS04405: LRK53_RS04405 - glycosyltransferase, at 1,024,570 to 1,025,763 _RS04405 LRK53_RS04410: LRK53_RS04410 - hypothetical protein, at 1,025,760 to 1,026,137 _RS04410 LRK53_RS04415: LRK53_RS04415 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 1,026,354 to 1,027,469 _RS04415 LRK53_RS04420: LRK53_RS04420 - polysaccharide biosynthesis protein, at 1,027,474 to 1,028,490 _RS04420 LRK53_RS04425: LRK53_RS04425 - SDR family oxidoreductase, at 1,028,508 to 1,029,362 _RS04425
Group Condition LRK53_RS04405 LRK53_RS04410 LRK53_RS04415 LRK53_RS04420 LRK53_RS04425
biofilm assay; biofilm sample Biofilm; Day2; SGW; pH7 -0.8 N.D. -0.2 -0.6 -0.1
stress R2A_PIPES with Cobalt chloride 1024 uM -0.3 N.D. -0.2 -0.1 -0.8
no stress control R2A_PIPES no stress control -0.5 N.D. -0.2 -0.2 -0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; -0.3 N.D. -0.6 -0.0 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.1 N.D. -0.5 -0.3 -0.4
pH pH4.8 -0.3 N.D. -0.4 -0.1 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.4 N.D. -0.6 -0.0 +0.0
biofilm assay; biofilm sample Biofilm; Day4; SGW; pH7 -0.4 N.D. -0.3 -0.3 +0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.2 N.D. -0.5 -0.3 +0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 N.D. -0.5 +0.0 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 N.D. -0.6 +0.1 -0.0
stress R2A_PIPES with Cobalt chloride 1024 uM -0.2 N.D. -0.2 -0.1 -0.2
pH pH5 +0.1 N.D. -0.5 -0.1 -0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.1 N.D. -0.3 -0.3 -0.1
biofilm assay; planktonic sample planktonic; Day4; SGW; +0.2 N.D. -0.2 -0.6 +0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -0.6 N.D. -0.1 +0.2 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 N.D. -0.4 +0.2 +0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.1 N.D. -0.5 +0.1 +0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.4 N.D. -0.2 -0.0 +0.5
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -0.3 N.D. -0.2 +0.3 +0.2
nutrient defined media with 20AA_mix -0.3 N.D. -0.1 +0.1 +0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 N.D. -0.4 +0.1 +0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -0.4 N.D. +0.1 +0.4 +0.0
nutrient defined media with L-Serine +0.2 N.D. -0.2 +0.3 -0.1
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +0.2 N.D. +0.0 +0.3 +0.2
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +0.3 N.D. +0.1 +0.2 +0.3
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM +0.3 N.D. +0.2 +0.2 +0.2
biofilm assay; biofilm sample biofilm; Day4; SGW; Aluminum chloride 1mM +0.0 N.D. +0.3 +0.2 +0.5
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM +0.4 N.D. +0.3 +0.5 +0.3
biofilm assay; biofilm sample Biofilm; Day4; SGW; Manganese (II) chloride tetrahydrate 10mM +0.3 N.D. +0.5 +0.4 +0.6
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