Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS02575 and LRK53_RS02580 are separated by 190 nucleotidesLRK53_RS02580 and LRK53_RS02585 are separated by 468 nucleotidesLRK53_RS02585 and LRK53_RS02590 are separated by 96 nucleotidesLRK53_RS02590 and LRK53_RS02595 are separated by 27 nucleotides LRK53_RS02575: LRK53_RS02575 - ACP phosphodiesterase, at 585,910 to 586,503 _RS02575 LRK53_RS02580: LRK53_RS02580 - c-type cytochrome, at 586,694 to 587,215 _RS02580 LRK53_RS02585: LRK53_RS02585 - efflux RND transporter periplasmic adaptor subunit, at 587,684 to 588,934 _RS02585 LRK53_RS02590: LRK53_RS02590 - hypothetical protein, at 589,031 to 589,219 _RS02590 LRK53_RS02595: LRK53_RS02595 - efflux RND transporter permease subunit, at 589,247 to 592,486 _RS02595
Group Condition LRK53_RS02575 LRK53_RS02580 LRK53_RS02585 LRK53_RS02590 LRK53_RS02595
nutrient defined media with L-Serine +0.2 -0.4 -3.3 N.D. -3.1
nutrient defined media with L-Serine -0.1 -0.4 -3.0 N.D. -3.1
nutrient defined media with D-Glucose +0.1 +0.2 -2.8 N.D. -2.9
nutrient defined media with D-Glucose +0.1 +0.1 -2.9 N.D. -2.7
nutrient defined media with 20AA_mix -0.0 +0.3 -2.6 N.D. -2.6
nutrient defined media with 20AA_mix +0.2 +0.4 -2.6 N.D. -2.6
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.2 -1.8 -0.0 N.D. -0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.2 -1.7 -0.1 N.D. -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 -1.3 +0.0 N.D. +0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 -1.1 -0.2 N.D. -0.3
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.4 -1.6 -0.1 N.D. -0.1
pH pH4.8 +0.1 -1.6 +0.1 N.D. +0.1
stress R2A_PIPES with Cobalt chloride 512 uM +0.1 -1.2 +0.0 N.D. -0.2
pH pH5 +0.2 -1.2 -0.0 N.D. -0.2
pH pH4.8 +0.2 -1.9 +0.3 N.D. +0.2
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.5 -1.6 -0.0 N.D. -0.0
pH pH4.5 +0.1 -1.6 +0.2 N.D. +0.2
pH pH4 +0.2 -1.7 +0.2 N.D. +0.2
no stress control R2A_PIPES no stress control +0.3 -1.2 -0.0 N.D. -0.2
stress R2A_PIPES with Zinc chloride 5120 uM +0.3 -1.4 +0.1 N.D. -0.1
stress R2A_PIPES with Cobalt chloride 1024 uM +0.2 -0.8 -0.2 N.D. -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 -1.0 +0.0 N.D. -0.2
no stress control R2A_PIPES no stress control +0.2 -1.0 -0.0 N.D. -0.2
stress R2A_PIPES with Cobalt chloride 1024 uM +0.2 -0.6 -0.2 N.D. -0.4
pH pH4.5 +0.3 -1.7 +0.3 N.D. +0.2
pH pH5 +0.2 -1.1 +0.0 N.D. +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM +0.3 -1.0 -0.1 N.D. -0.1
stress R2A_PIPES with Cobalt chloride 512 uM +0.4 -0.7 -0.0 N.D. -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 -0.9 +0.1 N.D. +0.1
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM +0.3 -0.8 +0.3 N.D. +0.1
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