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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp000427505 FW510-R12
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK53_RS02480 and LRK53_RS02485 are separated by 51 nucleotides
LRK53_RS02485 and LRK53_RS02490 overlap by 4 nucleotides
LRK53_RS02490 and LRK53_RS02495 are separated by 21 nucleotides
LRK53_RS02495 and LRK53_RS02500 are separated by 1392 nucleotides
LRK53_RS02480: LRK53_RS02480 - glycosyltransferase family 2 protein, at 570,193 to 570,909
_RS02480
LRK53_RS02485: LRK53_RS02485 - hypothetical protein, at 570,961 to 571,155
_RS02485
LRK53_RS02490: LRK53_RS02490 - hypothetical protein, at 571,152 to 571,319
_RS02490
LRK53_RS02495: LRK53_RS02495 - hypothetical protein, at 571,341 to 572,099
_RS02495
LRK53_RS02500: LRK53_RS02500 - hypothetical protein, at 573,492 to 574,121
_RS02500
Group
Condition
LRK53
_RS02480
LRK53
_RS02485
LRK53
_RS02490
LRK53
_RS02495
LRK53
_RS02500
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
-0.3
N.D.
-0.1
-0.4
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
N.D.
-0.8
N.D.
+0.0
-0.1
biofilm assay; planktonic sample
planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
-0.4
N.D.
-0.6
+0.1
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
-0.4
N.D.
-0.5
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.4
N.D.
-0.4
-0.0
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
+0.4
N.D.
-0.7
-0.5
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
-0.4
N.D.
-0.0
-0.3
biofilm assay; planktonic sample
planktonic; Day1; NLDM;
N.D.
-0.6
N.D.
-0.3
+0.1
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
N.D.
-0.2
N.D.
-0.0
-0.4
biofilm assay; biofilm sample
Biofilm; Day4; SGW; Manganese (II) chloride tetrahydrate 10mM
N.D.
-0.3
N.D.
-0.2
-0.2
stress
R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
N.D.
-0.1
N.D.
-0.4
+0.1
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
N.D.
-0.5
N.D.
+0.1
-0.0
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
N.D.
-0.3
N.D.
-0.3
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.1
N.D.
-0.4
+0.3
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
+0.4
N.D.
-0.3
-0.3
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
N.D.
-0.3
N.D.
-0.1
+0.2
biofilm assay; planktonic sample
Planktonic; Day2; SGW; pH7
N.D.
-0.2
N.D.
+0.2
-0.2
pH
pH4.8
N.D.
-0.2
N.D.
+0.3
-0.1
pH
pH4.3
N.D.
+0.3
N.D.
-0.2
-0.3
nutrient
defined media with L-Serine
N.D.
+0.2
N.D.
-0.0
-0.3
nutrient
defined media with D-Glucose
N.D.
-0.4
N.D.
+0.2
+0.2
pH
pH4.5
N.D.
+0.3
N.D.
-0.3
+0.1
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
N.D.
-0.2
N.D.
+0.5
-0.2
biofilm assay; biofilm sample
biofilm; Day2; NLDM;
N.D.
+0.3
N.D.
+0.2
-0.4
no stress control
R2A_PIPES no stress control
N.D.
+0.2
N.D.
+0.3
-0.2
biofilm assay; biofilm sample
Biofilm; Day2; SGW; pH7
N.D.
+0.4
N.D.
-0.2
+0.3
nutrient
defined media with 20AA_mix
N.D.
+0.3
N.D.
+0.3
-0.1
no stress control
R2A_PIPES no stress control
N.D.
-0.1
N.D.
+0.4
+0.3
nutrient
defined media with 20AA_mix
N.D.
+0.2
N.D.
+0.3
+0.1
pH
pH5
N.D.
+0.2
N.D.
+0.3
+0.2
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