Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS00360 and LRK53_RS00365 are separated by 309 nucleotidesLRK53_RS00365 and LRK53_RS00370 are separated by 61 nucleotidesLRK53_RS00370 and LRK53_RS00375 are separated by 35 nucleotidesLRK53_RS00375 and LRK53_RS00380 are separated by 48 nucleotides LRK53_RS00360: LRK53_RS00360 - NAD(P)H-dependent oxidoreductase, at 82,454 to 83,026 _RS00360 LRK53_RS00365: LRK53_RS00365 - hypothetical protein, at 83,336 to 84,967 _RS00365 LRK53_RS00370: LRK53_RS00370 - DNA starvation/stationary phase protection protein, at 85,029 to 85,574 _RS00370 LRK53_RS00375: LRK53_RS00375 - NAD(P)-dependent oxidoreductase, at 85,610 to 86,221 _RS00375 LRK53_RS00380: LRK53_RS00380 - DUF308 domain-containing protein, at 86,270 to 86,812 _RS00380
Group Condition LRK53_RS00360 LRK53_RS00365 LRK53_RS00370 LRK53_RS00375 LRK53_RS00380
nutrient defined media with 20AA_mix -0.2 -0.1 -3.1 +1.0 -2.6
nutrient defined media with 20AA_mix -0.1 -0.2 -3.1 +1.2 -2.6
biofilm assay; biofilm sample Biofilm; Day2; SGW; pH7 -0.1 -0.0 -0.0 -0.3 -4.1
pH pH4.5 -0.2 -0.1 -0.4 -0.7 -2.9
biofilm assay; planktonic sample planktonic; Day4; SGW; -0.2 +0.0 -0.2 +0.7 -3.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.0 -0.1 -0.2 +0.2 -2.1
stress R2A_PIPES with Zinc chloride 5120 uM +0.1 +0.1 -0.7 -0.1 -1.3
no stress control R2A_PIPES no stress control -0.2 -0.0 -0.2 +0.5 -1.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -0.2 -0.0 -0.4 +0.8 -1.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.2 -0.2 -0.3 -0.5 +0.4
no stress control R2A_PIPES no stress control -0.2 -0.3 +0.4 +0.5 -0.7
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 -0.0 -0.1 +0.5 -0.6
stress R2A_PIPES with Cobalt chloride 1024 uM -0.1 -0.2 -0.1 -0.5 +0.7
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM -0.1 -0.2 -0.0 -0.5 +0.8
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.5 -0.1 -0.3 +0.0 +1.0
biofilm assay; biofilm sample Biofilm; Day2; SGW; pH7 -0.3 -0.2 -0.4 +0.3 +0.7
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.5 -0.2 -0.2 +0.5 +1.0
pH pH4.8 -0.2 -0.2 -0.0 -0.0 +1.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 -0.3 +0.1 +0.5 +0.5
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.1 +0.2 -0.5 -0.4 +1.6
stress R2A_PIPES with Cobalt chloride 1024 uM -0.1 -0.2 -0.5 +0.2 +1.4
nutrient defined media with L-Serine -0.1 -0.1 +0.1 +0.6 +0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 -0.3 -0.1 +0.8 +0.8
stress R2A_PIPES with Nickel (II) chloride 848 uM -0.1 +0.0 -0.4 +0.6 +1.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.0 -0.2 +0.5 +1.1
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.1 -0.2 -0.2 +0.9 +0.9
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +0.1 +0.0 +0.1 +0.3 +1.0
pH pH4.5 -0.1 -0.0 -0.2 +0.5 +1.3
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.1 -0.2 +0.3 +0.4 +1.2
nutrient defined media with D-Glucose -0.1 -0.2 +0.3 +0.6 +1.1
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