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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
yeeO and Asn_trna are separated by 100 nucleotides
Asn_trna and ycdB are separated by 449 nucleotides
ycdB and amn are separated by 342 nucleotides
amn and shiA are separated by 101 nucleotides
JDDGAC_29295: yeeO - toxic metabolite efflux MATE transporter YeeO, at 5,587,520 to 5,588,974
yeeO
JDDGAC_29300: Asn_trna - tRNA-Asn(gtt), at 5,589,075 to 5,589,150
_trna
JDDGAC_29305: ycdB - putative transcriptional regulatory protein YcdB, at 5,589,600 to 5,590,316
ycdB
JDDGAC_29310: amn - AMP nucleosidase, at 5,590,659 to 5,592,113
amn
JDDGAC_29315: shiA - shikimate transporter, at 5,592,215 to 5,593,531
shiA
Group
Condition
JDDGAC
_29295
JDDGAC
_29300
JDDGAC
_29305
JDDGAC
_29310
JDDGAC
_29315
yeeO
Asn_trna
ycdB
amn
shiA
phage
WM_K30
-0.2
N.D.
-0.4
-0.1
-0.2
phage
WM_Bas31
-0.2
N.D.
-0.7
-0.1
-0.0
no phage control
Control_ECRC98_WM
+0.1
N.D.
-0.9
+0.2
-0.3
no phage control
Control_ECRC98_WM
+0.1
N.D.
-0.5
-0.2
+0.1
phage
WM_JK32
-0.2
N.D.
-0.1
+0.1
-0.3
phage
WM_EV240
+0.1
N.D.
-0.4
-0.1
-0.1
no phage control
Control_ECRC98_WM
-0.1
N.D.
-0.2
-0.1
+0.0
no phage control
Control_ECRC98_WM
-0.2
N.D.
-0.1
-0.1
+0.1
phage
WM_JK45
-0.1
N.D.
-0.1
+0.1
-0.2
phage
WM_K30
-0.1
N.D.
-0.0
+0.0
+0.0
phage
WM_Bas09
-0.1
N.D.
-0.3
+0.3
+0.1
phage
WM_TP12
-0.4
N.D.
+0.3
+0.1
+0.1
phage
WM_JK45
+0.3
N.D.
+0.4
-0.1
-0.4
phage
WM_TP12
-0.0
N.D.
+0.2
+0.1
+0.1
phage
WM_JK32
+0.0
N.D.
+0.6
+0.2
-0.2
phage
WM_Bas09
-0.1
N.D.
+0.2
+0.3
+0.3
phage
WM_Bas31
+0.2
N.D.
+1.0
-0.0
-0.0
phage
WM_EV240
+0.1
N.D.
+1.6
+0.1
-0.0
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