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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
yegQ and yegP are separated by 147 nucleotides
yegP and baeR are separated by 190 nucleotides
baeR and baeS overlap by 4 nucleotides
baeS and mdtD overlap by 4 nucleotides
JDDGAC_28275: yegQ - tRNA 5-hydroxyuridine modification protein YegQ, at 5,416,773 to 5,418,134
yegQ
JDDGAC_28280: yegP - UPF0339 protein YegP, at 5,418,282 to 5,418,614
yegP
JDDGAC_28285: baeR - two-component system response regulator BaeR, at 5,418,805 to 5,419,527
baeR
JDDGAC_28290: baeS - two-component system sensor histidine kinase BaeS, at 5,419,524 to 5,420,927
baeS
JDDGAC_28295: mdtD - Putative multidrug resistance protein MdtD, at 5,420,924 to 5,422,339
mdtD
Group
Condition
JDDGAC
_28275
JDDGAC
_28280
JDDGAC
_28285
JDDGAC
_28290
JDDGAC
_28295
yegQ
yegP
baeR
baeS
mdtD
no phage control
Control_ECRC98_WM
-0.4
-0.3
+0.1
-1.3
-0.1
phage
WM_EV240
-0.0
-0.5
+0.0
-1.7
+0.3
no phage control
Control_ECRC98_WM
-0.0
-0.4
-0.3
-1.3
+0.3
phage
WM_Bas09
+0.6
-0.0
-0.7
-1.0
-0.2
phage
WM_Bas31
-0.2
-0.4
-0.3
-0.3
+0.1
phage
WM_JK45
-0.0
-0.1
-0.6
-0.2
-0.0
no phage control
Control_ECRC98_WM
+0.2
-0.5
-0.3
-0.1
-0.2
phage
WM_K30
-0.1
-0.2
-0.3
-0.3
-0.0
phage
WM_JK45
+0.3
-0.3
-0.4
-0.6
+0.2
phage
WM_EV240
+0.0
-0.4
-0.3
+0.7
-0.5
no phage control
Control_ECRC98_WM
+0.1
+0.2
-0.2
-0.5
-0.0
phage
WM_TP12
+0.2
-0.3
-0.5
+0.2
-0.0
phage
WM_JK32
-0.0
+0.0
-0.2
-0.1
+0.0
phage
WM_JK32
-0.3
+0.1
-0.4
+0.0
+0.3
phage
WM_Bas09
+0.0
-0.1
-0.3
+0.2
-0.0
phage
WM_Bas31
-0.3
-0.1
-0.3
+0.5
-0.1
phage
WM_K30
+0.1
-0.0
-0.3
-0.0
+0.1
phage
WM_TP12
+0.1
+0.1
-0.5
+0.0
+0.3
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