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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
yfaZ and yfaY are separated by 99 nucleotides
yfaY and rhmR are separated by 219 nucleotides
rhmR and rhmD are separated by 14 nucleotides
rhmD and JDDGAC_26995 are separated by 56 nucleotides
JDDGAC_26975: yfaZ - Outer membrane protein YfaZ, at 5,167,482 to 5,168,024
yfaZ
JDDGAC_26980: yfaY - nicotinamide mononucleotide deamidase-related protein YfaY, at 5,168,124 to 5,169,326
yfaY
JDDGAC_26985: rhmR - Uncharacterized HTH-type transcriptional regulator RhmR, at 5,169,546 to 5,170,328
rhmR
JDDGAC_26990: rhmD - L-rhamnonate dehydratase, at 5,170,343 to 5,171,548
rhmD
JDDGAC_26995: JDDGAC_26995 - MFS transporter, at 5,171,605 to 5,172,894
_26995
Group
Condition
JDDGAC
_26975
JDDGAC
_26980
JDDGAC
_26985
JDDGAC
_26990
JDDGAC
_26995
yfaZ
yfaY
rhmR
rhmD
phage
WM_EV240
+0.0
-0.8
-0.4
+0.0
-0.6
phage
WM_JK45
-0.0
-0.4
-0.3
-0.0
-0.2
phage
WM_EV240
-0.3
-0.3
-0.7
-0.1
+0.5
no phage control
Control_ECRC98_WM
-0.1
-0.2
-0.1
-0.2
-0.2
phage
WM_K30
-0.0
+0.2
-0.4
-0.2
-0.1
phage
WM_Bas09
-0.0
-0.0
-0.2
-0.3
-0.1
phage
WM_K30
+0.1
-0.2
-0.3
-0.0
-0.1
phage
WM_JK32
-0.1
-0.1
-0.5
+0.1
+0.1
no phage control
Control_ECRC98_WM
-0.0
-0.3
+0.2
-0.5
+0.2
phage
WM_Bas31
-0.1
-0.2
-0.1
+0.2
+0.1
phage
WM_TP12
-0.1
-0.3
+0.1
-0.2
+0.3
no phage control
Control_ECRC98_WM
+0.2
+0.0
-0.1
-0.2
+0.0
phage
WM_JK32
+0.0
+0.0
-0.0
-0.1
-0.0
phage
WM_TP12
+0.0
-0.0
+0.1
-0.2
+0.2
phage
WM_JK45
-0.0
-0.1
+0.0
+0.1
+0.1
phage
WM_Bas09
+0.2
+0.2
-0.1
-0.2
+0.2
no phage control
Control_ECRC98_WM
+0.3
+0.2
-0.1
+0.1
-0.1
phage
WM_Bas31
+0.3
-0.0
+0.2
-0.0
+0.1
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