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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
cysZ and zipA are separated by 229 nucleotides
zipA and ligA are separated by 70 nucleotides
ligA and ypeB are separated by 1 nucleotides
ypeB and yfeH overlap by 4 nucleotides
JDDGAC_26155: cysZ - sulfate transporter CysZ, at 5,003,232 to 5,003,993
cysZ
JDDGAC_26160: zipA - cell division protein ZipA, at 5,004,223 to 5,005,221
zipA
JDDGAC_26165: ligA - NAD-dependent DNA ligase LigA, at 5,005,292 to 5,007,307
ligA
JDDGAC_26170: ypeB - Uncharacterized protein YpeB, at 5,007,309 to 5,007,527
ypeB
JDDGAC_26175: yfeH - Putative symporter YfeH, at 5,007,524 to 5,008,522
yfeH
Group
Condition
JDDGAC
_26155
JDDGAC
_26160
JDDGAC
_26165
JDDGAC
_26170
JDDGAC
_26175
cysZ
zipA
ligA
ypeB
yfeH
phage
WM_JK45
-0.2
N.D.
N.D.
-0.0
-0.3
phage
WM_K30
-0.0
N.D.
N.D.
-0.1
-0.0
phage
WM_JK32
-0.1
N.D.
N.D.
+0.0
-0.1
phage
WM_JK32
-0.3
N.D.
N.D.
+0.1
+0.0
no phage control
Control_ECRC98_WM
+0.1
N.D.
N.D.
-0.1
-0.2
phage
WM_TP12
-0.0
N.D.
N.D.
+0.0
-0.1
phage
WM_Bas09
+0.1
N.D.
N.D.
-0.1
-0.1
phage
WM_JK45
-0.0
N.D.
N.D.
+0.1
-0.2
phage
WM_TP12
+0.1
N.D.
N.D.
-0.1
+0.1
no phage control
Control_ECRC98_WM
-0.4
N.D.
N.D.
-0.0
+0.4
phage
WM_Bas31
+0.3
N.D.
N.D.
-0.3
+0.1
phage
WM_K30
+0.1
N.D.
N.D.
+0.1
-0.2
no phage control
Control_ECRC98_WM
-0.1
N.D.
N.D.
+0.1
+0.1
phage
WM_EV240
+0.0
N.D.
N.D.
+0.2
+0.0
phage
WM_Bas09
+0.3
N.D.
N.D.
-0.2
+0.2
phage
WM_Bas31
+0.2
N.D.
N.D.
+0.3
-0.0
no phage control
Control_ECRC98_WM
+0.2
N.D.
N.D.
-0.0
+0.5
phage
WM_EV240
+0.5
N.D.
N.D.
+0.3
+0.1
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