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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
hemF and amiA are separated by 3 nucleotides
amiA and ypeA are separated by 213 nucleotides
ypeA and yfeZ overlap by 14 nucleotides
yfeZ and yfeY are separated by 60 nucleotides
JDDGAC_26045: hemF - oxygen-dependent coproporphyrinogen oxidase, at 4,982,620 to 4,983,519
hemF
JDDGAC_26050: amiA - N-acetylmuramoyl-L-alanine amidase AmiA, at 4,983,523 to 4,984,392
amiA
JDDGAC_26055: ypeA - GNAT family acetyltransferase, at 4,984,606 to 4,985,031
ypeA
JDDGAC_26060: yfeZ - Inner membrane protein YfeZ, at 4,985,018 to 4,985,467
yfeZ
JDDGAC_26065: yfeY - RpoE-regulated lipoprotein, at 4,985,528 to 4,986,103
yfeY
Group
Condition
JDDGAC
_26045
JDDGAC
_26050
JDDGAC
_26055
JDDGAC
_26060
JDDGAC
_26065
hemF
amiA
ypeA
yfeZ
yfeY
phage
WM_EV240
-0.3
-0.4
-0.0
-0.7
-0.2
phage
WM_K30
-0.2
+0.0
-0.5
-0.8
+0.3
phage
WM_JK45
-0.1
+0.1
-0.1
-1.0
+0.2
phage
WM_JK32
-0.1
+0.3
-0.3
-0.3
-0.3
phage
WM_EV240
+0.0
-0.3
-0.7
+0.2
+0.0
no phage control
Control_ECRC98_WM
+0.2
-0.1
-0.0
-0.5
-0.1
phage
WM_K30
+0.3
-0.2
-0.1
-0.4
-0.2
no phage control
Control_ECRC98_WM
+0.2
-0.1
-0.3
-0.3
+0.0
no phage control
Control_ECRC98_WM
+0.1
+0.0
+0.4
-0.6
-0.1
phage
WM_TP12
+0.1
-0.0
+0.0
-0.5
+0.0
phage
WM_JK32
+0.1
+0.3
-0.1
-0.1
-0.4
phage
WM_JK45
-0.3
+0.4
-0.1
-0.6
+0.4
phage
WM_Bas09
+0.1
-0.1
+0.5
-0.3
-0.5
phage
WM_Bas09
+0.3
+0.3
+0.2
+0.2
-1.0
phage
WM_TP12
-0.0
-0.3
+0.1
-0.0
+0.3
phage
WM_Bas31
-0.1
-0.2
-0.1
+0.4
+0.3
phage
WM_Bas31
+0.2
+0.3
-0.1
-0.1
+0.3
no phage control
Control_ECRC98_WM
+0.1
+0.2
+0.2
+0.2
-0.1
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