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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
shoB and yfhL are separated by 193 nucleotides
yfhL and yfhH are separated by 55 nucleotides
yfhH and yfhb are separated by 208 nucleotides
yfhb and tadA are separated by 57 nucleotides
JDDGAC_25105: shoB - Small toxic protein ShoB, at 4,798,847 to 4,798,927
shoB
JDDGAC_25110: yfhL - 4Fe-4S dicluster ferredoxin YfhL, at 4,799,121 to 4,799,381
yfhL
JDDGAC_25115: yfhH - MurR/RpiR family transcriptional regulator, at 4,799,437 to 4,800,285
yfhH
JDDGAC_25120: yfhb - phosphatidylglycerophosphatase C, at 4,800,494 to 4,801,129
yfhb
JDDGAC_25125: tadA - tRNA adenosine(34) deaminase TadA, at 4,801,187 to 4,801,690
tadA
Group
Condition
JDDGAC
_25105
JDDGAC
_25110
JDDGAC
_25115
JDDGAC
_25120
JDDGAC
_25125
shoB
yfhL
yfhH
yfhb
tadA
phage
WM_JK32
N.D.
-0.4
+0.0
-0.0
N.D.
phage
WM_JK45
N.D.
-0.1
-0.2
+0.1
N.D.
phage
WM_K30
N.D.
-0.4
-0.2
+0.4
N.D.
phage
WM_Bas09
N.D.
+0.3
-0.1
-0.2
N.D.
phage
WM_EV240
N.D.
+0.2
-0.1
+0.1
N.D.
phage
WM_Bas09
N.D.
+0.1
+0.1
-0.1
N.D.
phage
WM_TP12
N.D.
+0.2
+0.0
-0.0
N.D.
no phage control
Control_ECRC98_WM
N.D.
+0.0
-0.0
+0.2
N.D.
no phage control
Control_ECRC98_WM
N.D.
+0.3
-0.6
+0.6
N.D.
phage
WM_JK45
N.D.
+0.4
-0.3
+0.1
N.D.
phage
WM_Bas31
N.D.
+0.5
-0.1
+0.0
N.D.
phage
WM_JK32
N.D.
+0.1
+0.0
+0.3
N.D.
no phage control
Control_ECRC98_WM
N.D.
-0.0
-0.0
+0.6
N.D.
no phage control
Control_ECRC98_WM
N.D.
+0.3
-0.2
+0.4
N.D.
phage
WM_K30
N.D.
+0.3
+0.3
+0.2
N.D.
phage
WM_TP12
N.D.
+0.4
+0.1
+0.3
N.D.
phage
WM_Bas31
N.D.
+0.4
+0.4
+0.4
N.D.
phage
WM_EV240
N.D.
+0.6
+0.3
+0.3
N.D.
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