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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
rseB and rseC overlap by 4 nucleotides
rseC and lepA are separated by 197 nucleotides
lepA and lepB are separated by 15 nucleotides
lepB and rnc are separated by 272 nucleotides
JDDGAC_25050: rseB - sigma-E factor regulatory protein RseB, at 4,790,288 to 4,791,244
rseB
JDDGAC_25060: rseC - SoxR-reducing system protein RseC, at 4,791,241 to 4,791,720
rseC
JDDGAC_25065: lepA - translation elongation factor 4, at 4,791,918 to 4,793,717
lepA
JDDGAC_25070: lepB - signal peptidase I, at 4,793,733 to 4,794,707
lepB
JDDGAC_25075: rnc - ribonuclease III, at 4,794,980 to 4,795,660
rnc
Group
Condition
JDDGAC
_25050
JDDGAC
_25060
JDDGAC
_25065
JDDGAC
_25070
JDDGAC
_25075
rseB
rseC
lepA
lepB
rnc
phage
WM_EV240
-0.8
-3.3
-3.1
N.D.
N.D.
phage
WM_EV240
-1.2
-3.0
-0.1
N.D.
N.D.
no phage control
Control_ECRC98_WM
-0.6
-0.3
-1.6
N.D.
N.D.
phage
WM_Bas09
-0.1
-0.2
-2.2
N.D.
N.D.
phage
WM_K30
-0.2
-0.0
-2.2
N.D.
N.D.
phage
WM_Bas09
-0.4
-0.3
-1.5
N.D.
N.D.
phage
WM_JK45
-0.4
-0.1
-1.6
N.D.
N.D.
no phage control
Control_ECRC98_WM
-0.3
-0.3
-1.3
N.D.
N.D.
phage
WM_JK32
-0.1
-0.1
-1.6
N.D.
N.D.
phage
WM_JK45
+0.1
-0.1
-1.4
N.D.
N.D.
phage
WM_Bas31
+0.0
-0.3
-1.0
N.D.
N.D.
no phage control
Control_ECRC98_WM
-0.4
-0.5
-0.4
N.D.
N.D.
phage
WM_TP12
-0.4
-0.3
-0.3
N.D.
N.D.
phage
WM_TP12
-0.3
-0.4
-0.2
N.D.
N.D.
phage
WM_JK32
-0.2
+0.1
-0.7
N.D.
N.D.
phage
WM_K30
+0.1
-0.2
-0.5
N.D.
N.D.
phage
WM_Bas31
-0.1
-0.3
-0.2
N.D.
N.D.
no phage control
Control_ECRC98_WM
-0.1
-0.4
-0.1
N.D.
N.D.
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