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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
pssL and pat are separated by 88 nucleotides
pat and tapT are separated by 31 nucleotides
tapT and trxC are separated by 68 nucleotides
trxC and yfiF are separated by 206 nucleotides
JDDGAC_24980: pssL - Protein PssL, at 4,776,487 to 4,776,528
pssL
JDDGAC_24985: pat - protein lysine acetyltransferase, at 4,776,617 to 4,779,277
pat
JDDGAC_24990: tapT - tRNA-uridine aminocarboxypropyltransferase, at 4,779,309 to 4,780,007
tapT
JDDGAC_24995: trxC - thioredoxin TrxC, at 4,780,076 to 4,780,495
trxC
JDDGAC_25000: yfiF - tRNA/rRNA methyltransferase, at 4,780,702 to 4,781,739
yfiF
Group
Condition
JDDGAC
_24980
JDDGAC
_24985
JDDGAC
_24990
JDDGAC
_24995
JDDGAC
_25000
pssL
pat
tapT
trxC
yfiF
phage
WM_JK45
N.D.
-0.0
-0.1
-1.5
-0.3
phage
WM_Bas31
N.D.
-0.1
-0.3
-0.6
-0.5
no phage control
Control_ECRC98_WM
N.D.
-0.0
+0.0
-1.1
-0.5
phage
WM_Bas09
N.D.
-0.0
-0.2
-1.0
-0.3
phage
WM_JK32
N.D.
+0.1
+0.1
-0.9
-0.2
phage
WM_EV240
N.D.
+0.1
-0.1
-0.6
-0.3
phage
WM_TP12
N.D.
-0.1
-0.2
-0.3
-0.2
phage
WM_EV240
N.D.
-0.1
+0.1
-0.5
-0.3
phage
WM_Bas09
N.D.
+0.0
-0.1
-0.4
-0.2
phage
WM_JK45
N.D.
+0.0
+0.1
-0.5
-0.2
no phage control
Control_ECRC98_WM
N.D.
-0.0
-0.0
-0.6
+0.1
no phage control
Control_ECRC98_WM
N.D.
-0.1
+0.1
+0.0
-0.6
phage
WM_JK32
N.D.
+0.1
-0.0
-0.1
-0.4
phage
WM_Bas31
N.D.
-0.1
+0.0
-0.1
-0.2
phage
WM_K30
N.D.
-0.1
-0.0
+0.2
-0.5
phage
WM_K30
N.D.
+0.1
-0.1
-0.3
+0.0
no phage control
Control_ECRC98_WM
N.D.
+0.0
-0.3
-0.2
+0.3
phage
WM_TP12
N.D.
+0.1
-0.0
+0.6
-0.2
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