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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
rimM and trmD are separated by 30 nucleotides
trmD and rplS are separated by 41 nucleotides
rplS and yfiB are separated by 76 nucleotides
yfiB and dgcN are separated by 15 nucleotides
JDDGAC_24845: rimM - ribosome maturation factor RimM, at 4,753,389 to 4,753,937
rimM
JDDGAC_24850: trmD - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 4,753,968 to 4,754,735
trmD
JDDGAC_24855: rplS - 50S ribosomal protein L19, at 4,754,777 to 4,755,124
rplS
JDDGAC_24860: yfiB - OmpA family protein, at 4,755,201 to 4,755,683
yfiB
JDDGAC_24865: dgcN - diguanylate cyclase DgcN, at 4,755,699 to 4,756,925
dgcN
Group
Condition
JDDGAC
_24845
JDDGAC
_24850
JDDGAC
_24855
JDDGAC
_24860
JDDGAC
_24865
rimM
trmD
rplS
yfiB
dgcN
phage
WM_JK32
N.D.
N.D.
N.D.
-0.3
-0.2
phage
WM_JK45
N.D.
N.D.
N.D.
-0.1
-0.1
phage
WM_JK45
N.D.
N.D.
N.D.
-0.3
+0.1
phage
WM_JK32
N.D.
N.D.
N.D.
-0.0
-0.1
phage
WM_EV240
N.D.
N.D.
N.D.
-0.2
+0.1
phage
WM_TP12
N.D.
N.D.
N.D.
-0.1
+0.0
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
-0.4
+0.3
phage
WM_K30
N.D.
N.D.
N.D.
-0.1
-0.0
phage
WM_Bas31
N.D.
N.D.
N.D.
-0.0
-0.1
phage
WM_EV240
N.D.
N.D.
N.D.
-0.1
+0.0
phage
WM_K30
N.D.
N.D.
N.D.
-0.2
+0.1
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
+0.0
+0.0
phage
WM_TP12
N.D.
N.D.
N.D.
+0.1
+0.1
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
+0.2
+0.0
phage
WM_Bas31
N.D.
N.D.
N.D.
+0.3
+0.1
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
+0.2
+0.2
phage
WM_Bas09
N.D.
N.D.
N.D.
+0.5
+0.0
phage
WM_Bas09
N.D.
N.D.
N.D.
+0.5
+0.2
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