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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
nadK and grpE are separated by 122 nucleotides
grpE and yfjD are separated by 54 nucleotides
yfjD and ypjD are separated by 66 nucleotides
ypjD and ffh are separated by 91 nucleotides
JDDGAC_24815: nadK - NAD(+) kinase, at 4,747,709 to 4,748,587
nadK
JDDGAC_24820: grpE - nucleotide exchange factor GrpE, at 4,748,710 to 4,749,303
grpE
JDDGAC_24825: yfjD - UPF0053 inner membrane protein YfjD, at 4,749,358 to 4,750,599
yfjD
JDDGAC_24830: ypjD - Inner membrane protein YpjD, at 4,750,666 to 4,751,532
ypjD
JDDGAC_24835: ffh - signal recognition particle protein, at 4,751,624 to 4,752,985
ffh
Group
Condition
JDDGAC
_24815
JDDGAC
_24820
JDDGAC
_24825
JDDGAC
_24830
JDDGAC
_24835
nadK
grpE
yfjD
ypjD
ffh
phage
WM_JK45
N.D.
N.D.
-0.3
-0.6
N.D.
phage
WM_Bas09
N.D.
N.D.
+0.0
-0.7
N.D.
phage
WM_TP12
N.D.
N.D.
-0.2
-0.4
N.D.
phage
WM_EV240
N.D.
N.D.
-0.4
-0.2
N.D.
phage
WM_Bas31
N.D.
N.D.
-0.1
-0.4
N.D.
phage
WM_JK45
N.D.
N.D.
-0.3
-0.1
N.D.
phage
WM_K30
N.D.
N.D.
-0.1
-0.3
N.D.
phage
WM_K30
N.D.
N.D.
+0.0
-0.4
N.D.
phage
WM_Bas31
N.D.
N.D.
-0.2
-0.2
N.D.
no phage control
Control_ECRC98_WM
N.D.
N.D.
+0.0
-0.4
N.D.
phage
WM_EV240
N.D.
N.D.
-0.2
-0.2
N.D.
phage
WM_JK32
N.D.
N.D.
-0.1
-0.2
N.D.
no phage control
Control_ECRC98_WM
N.D.
N.D.
+0.1
-0.4
N.D.
phage
WM_Bas09
N.D.
N.D.
-0.0
-0.3
N.D.
no phage control
Control_ECRC98_WM
N.D.
N.D.
+0.1
-0.3
N.D.
phage
WM_TP12
N.D.
N.D.
+0.1
-0.3
N.D.
phage
WM_JK32
N.D.
N.D.
+0.1
-0.2
N.D.
no phage control
Control_ECRC98_WM
N.D.
N.D.
+0.2
-0.2
N.D.
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