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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ygaP and ygaV are separated by 9 nucleotides
ygaV and yqaE are separated by 182 nucleotides
yqaE and kbp are separated by 83 nucleotides
kbp and csiR are separated by 0 nucleotides
JDDGAC_24540: ygaP - thiosulfate sulfurtransferase YgaP, at 4,700,412 to 4,700,930
ygaP
JDDGAC_24545: ygaV - putative HTH-type transcriptional regulator YgaV, at 4,700,940 to 4,701,239
ygaV
JDDGAC_24550: yqaE - UPF0057 membrane protein YqaE, at 4,701,422 to 4,701,580
yqaE
JDDGAC_24555: kbp - potassium binding protein Kbp, at 4,701,664 to 4,702,113
kbp
JDDGAC_24560: csiR - DNA-binding transcriptional regulator CsiR, at 4,702,114 to 4,702,776
csiR
Group
Condition
JDDGAC
_24540
JDDGAC
_24545
JDDGAC
_24550
JDDGAC
_24555
JDDGAC
_24560
ygaP
ygaV
yqaE
kbp
csiR
phage
WM_JK45
N.D.
-0.6
-0.4
-0.2
-0.5
phage
WM_JK32
N.D.
-0.4
-0.2
-0.1
-0.4
no phage control
Control_ECRC98_WM
N.D.
-0.2
+0.2
-0.4
-0.4
phage
WM_JK45
N.D.
-0.4
-0.2
+0.0
-0.2
no phage control
Control_ECRC98_WM
N.D.
-0.6
-0.0
+0.2
-0.3
phage
WM_Bas31
N.D.
-0.1
-0.3
-0.1
-0.3
phage
WM_K30
N.D.
-0.2
-0.2
+0.2
-0.4
no phage control
Control_ECRC98_WM
N.D.
-0.2
-0.2
-0.1
-0.1
phage
WM_TP12
N.D.
-0.4
+0.0
-0.0
-0.0
phage
WM_Bas09
N.D.
+0.1
+0.2
-0.5
-0.1
phage
WM_K30
N.D.
+0.2
-0.4
-0.1
-0.0
phage
WM_EV240
N.D.
+0.6
-0.2
-0.9
+0.3
phage
WM_JK32
N.D.
-0.1
+0.1
-0.2
+0.2
phage
WM_Bas31
N.D.
-0.1
+0.2
-0.1
-0.0
no phage control
Control_ECRC98_WM
N.D.
+0.2
+0.1
-0.0
-0.2
phage
WM_EV240
N.D.
+0.9
-0.3
+0.1
-0.5
phage
WM_Bas09
N.D.
+0.6
+0.4
+0.1
-0.5
phage
WM_TP12
N.D.
+0.1
+0.5
+0.1
-0.0
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