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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
hycE and hycF are separated by 9 nucleotides
hycF and hycG overlap by 1 nucleotides
hycG and hycH overlap by 4 nucleotides
hycH and hycI overlap by 8 nucleotides
JDDGAC_24255: hycE - formate hydrogenlyase subunit HycE, at 4,650,273 to 4,651,982
hycE
JDDGAC_24260: hycF - formate hydrogenlyase subunit HycF, at 4,651,992 to 4,652,534
hycF
JDDGAC_24265: hycG - formate hydrogenlyase subunit HycG, at 4,652,534 to 4,653,301
hycG
JDDGAC_24270: hycH - formate hydrogenlyase assembly protein HycH, at 4,653,298 to 4,653,708
hycH
JDDGAC_24275: hycI - hydrogenase maturation peptidase HycI, at 4,653,701 to 4,654,171
hycI
Group
Condition
JDDGAC
_24255
JDDGAC
_24260
JDDGAC
_24265
JDDGAC
_24270
JDDGAC
_24275
hycE
hycF
hycG
hycH
hycI
phage
WM_Bas09
-0.0
-0.8
-0.0
-0.1
+0.5
phage
WM_TP12
-0.0
-0.6
-0.0
+0.2
-0.0
phage
WM_JK45
-0.0
-0.5
-0.1
+0.3
-0.1
phage
WM_JK32
-0.1
-0.2
-0.1
-0.2
+0.2
phage
WM_Bas31
+0.1
-0.7
+0.2
+0.1
+0.1
phage
WM_TP12
+0.2
-0.5
-0.2
+0.1
+0.2
phage
WM_K30
+0.1
-0.7
-0.1
+0.2
+0.4
no phage control
Control_ECRC98_WM
+0.1
+0.1
-0.3
-0.0
+0.0
no phage control
Control_ECRC98_WM
+0.0
-0.5
+0.0
+0.0
+0.5
phage
WM_Bas09
-0.0
-0.0
+0.0
+0.2
-0.1
phage
WM_K30
-0.0
-0.2
+0.2
-0.0
+0.2
phage
WM_JK45
+0.0
+0.2
-0.0
-0.0
-0.0
no phage control
Control_ECRC98_WM
+0.0
-0.9
-0.0
+0.2
+1.0
phage
WM_JK32
+0.0
-0.4
+0.2
+0.1
+0.4
no phage control
Control_ECRC98_WM
+0.1
+0.6
+0.2
-0.3
+0.2
phage
WM_Bas31
+0.0
+0.6
+0.1
-0.0
+0.4
phage
WM_EV240
+0.0
+0.2
-0.0
+0.6
+0.5
phage
WM_EV240
+0.1
+1.2
+0.0
+0.2
+1.1
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