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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
speA and JDDGAC_22940 are separated by 145 nucleotides
JDDGAC_22940 and speB are separated by 135 nucleotides
speB and loiP are separated by 205 nucleotides
loiP and tkt are separated by 277 nucleotides
JDDGAC_22935: speA - biosynthetic arginine decarboxylase, at 4,390,576 to 4,392,552
speA
JDDGAC_22940: JDDGAC_22940 - Lipoprotein, at 4,392,698 to 4,393,429
_22940
JDDGAC_22945: speB - agmatinase, at 4,393,565 to 4,394,485
speB
JDDGAC_22950: loiP - metalloprotease LoiP, at 4,394,691 to 4,395,449
loiP
JDDGAC_22955: tkt - transketolase, at 4,395,727 to 4,397,718
tkt
Group
Condition
JDDGAC
_22935
JDDGAC
_22940
JDDGAC
_22945
JDDGAC
_22950
JDDGAC
_22955
speA
speB
loiP
tkt
phage
WM_JK45
-0.3
-0.3
-1.2
+0.3
-0.6
phage
WM_TP12
-0.3
-0.1
-1.2
+0.1
-0.4
phage
WM_EV240
-1.4
+0.2
-0.4
-0.2
+0.2
phage
WM_Bas31
-0.4
+0.1
-0.4
+0.0
-0.1
phage
WM_Bas31
-0.4
+0.1
-0.7
+0.1
+0.1
phage
WM_JK32
-0.7
-0.1
-0.4
+0.1
+0.4
phage
WM_EV240
-1.0
+0.3
-0.6
-0.2
+0.8
phage
WM_JK32
-0.5
-0.2
-0.4
+0.0
+0.4
phage
WM_K30
-0.6
+0.0
-0.4
+0.1
+0.2
phage
WM_TP12
-0.2
+0.1
-0.8
+0.0
+0.4
no phage control
Control_ECRC98_WM
+0.1
+0.2
-0.8
-0.2
+0.3
phage
WM_K30
-0.3
-0.1
-0.5
+0.1
+0.5
phage
WM_JK45
-0.7
+0.3
-0.8
+0.1
+0.8
no phage control
Control_ECRC98_WM
-0.1
+0.0
-0.0
+0.0
+0.0
no phage control
Control_ECRC98_WM
-0.4
+0.0
-0.2
+0.1
+0.8
phage
WM_Bas09
-0.1
-0.1
-0.2
-0.5
+1.5
phage
WM_Bas09
-0.4
+0.0
-0.5
-0.0
+1.5
no phage control
Control_ECRC98_WM
-0.1
+0.2
-0.3
+0.1
+1.0
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