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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
folB and bacA are separated by 90 nucleotides
bacA and cca are separated by 180 nucleotides
cca and ygiM are separated by 63 nucleotides
ygiM and ygiF are separated by 241 nucleotides
JDDGAC_22335: folB - bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase, at 4,273,853 to 4,274,221
folB
JDDGAC_22340: bacA - undecaprenyl-diphosphate phosphatase, at 4,274,312 to 4,275,133
bacA
JDDGAC_22350: cca - fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca, at 4,275,314 to 4,276,552
cca
JDDGAC_22355: ygiM - TIGR04211 family SH3 domain-containing protein, at 4,276,616 to 4,277,236
ygiM
JDDGAC_22360: ygiF - inorganic triphosphatase, at 4,277,478 to 4,278,779
ygiF
Group
Condition
JDDGAC
_22335
JDDGAC
_22340
JDDGAC
_22350
JDDGAC
_22355
JDDGAC
_22360
folB
bacA
cca
ygiM
ygiF
phage
WM_EV240
N.D.
-4.3
N.D.
+0.2
+1.7
phage
WM_EV240
N.D.
-4.0
N.D.
+0.4
+1.9
phage
WM_TP12
N.D.
-0.6
N.D.
+0.3
-0.2
phage
WM_JK45
N.D.
-0.0
N.D.
+0.1
+0.0
phage
WM_JK45
N.D.
-0.1
N.D.
+0.0
+0.3
phage
WM_TP12
N.D.
-0.1
N.D.
+0.1
+0.4
no phage control
Control_ECRC98_WM
N.D.
+0.3
N.D.
+0.1
-0.0
phage
WM_K30
N.D.
+0.5
N.D.
+0.0
+0.1
phage
WM_JK32
N.D.
+0.4
N.D.
+0.2
+0.1
phage
WM_JK32
N.D.
+0.2
N.D.
+0.2
+0.2
phage
WM_Bas09
N.D.
+0.4
N.D.
+0.3
-0.0
no phage control
Control_ECRC98_WM
N.D.
+0.5
N.D.
+0.1
+0.2
phage
WM_Bas31
N.D.
+0.6
N.D.
+0.2
+0.0
phage
WM_Bas31
N.D.
+0.7
N.D.
+0.0
+0.4
phage
WM_K30
N.D.
+0.8
N.D.
+0.1
+0.2
no phage control
Control_ECRC98_WM
N.D.
+1.0
N.D.
+0.4
-0.2
no phage control
Control_ECRC98_WM
N.D.
+0.8
N.D.
+0.3
+0.0
phage
WM_Bas09
N.D.
+0.6
N.D.
+0.3
+0.4
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