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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
tdcE and tdcF are separated by 13 nucleotides
tdcF and tdcG are separated by 71 nucleotides
tdcG and dlsT are separated by 274 nucleotides
dlsT and yhaM are separated by 27 nucleotides
JDDGAC_22050: tdcE - 2-ketobutyrate formate-lyase/pyruvate formate-lyase, at 4,215,924 to 4,218,218
tdcE
JDDGAC_22055: tdcF - enamine/imine deaminase, at 4,218,232 to 4,218,621
tdcF
JDDGAC_22060: tdcG - L-serine ammonia-lyase, at 4,218,693 to 4,220,057
tdcG
JDDGAC_22065: dlsT - putative serine transporter, at 4,220,332 to 4,221,663
dlsT
JDDGAC_22070: yhaM - UPF0597 protein YhaM, at 4,221,691 to 4,223,001
yhaM
Group
Condition
JDDGAC
_22050
JDDGAC
_22055
JDDGAC
_22060
JDDGAC
_22065
JDDGAC
_22070
tdcE
tdcF
tdcG
dlsT
yhaM
phage
WM_JK32
-0.1
-0.3
-0.1
-0.1
-0.1
phage
WM_K30
+0.0
-0.2
-0.0
-0.1
-0.2
phage
WM_EV240
+0.1
+0.0
-0.2
-0.3
-0.1
phage
WM_K30
-0.1
-0.1
-0.1
-0.0
-0.2
no phage control
Control_ECRC98_WM
-0.2
+0.1
-0.1
-0.1
+0.0
no phage control
Control_ECRC98_WM
+0.1
-0.1
-0.1
+0.0
-0.2
phage
WM_JK45
+0.0
-0.1
-0.1
-0.0
-0.1
phage
WM_TP12
-0.1
-0.3
+0.1
+0.0
-0.0
phage
WM_TP12
-0.2
+0.1
+0.1
-0.0
-0.1
phage
WM_JK32
-0.1
+0.2
-0.1
-0.2
+0.0
phage
WM_Bas09
+0.1
+0.1
-0.0
-0.3
-0.0
no phage control
Control_ECRC98_WM
+0.1
+0.2
-0.0
-0.1
-0.3
phage
WM_Bas09
-0.0
-0.1
+0.3
-0.2
+0.0
phage
WM_Bas31
-0.1
+0.2
+0.0
-0.0
-0.1
phage
WM_Bas31
-0.0
+0.0
+0.1
+0.2
-0.2
no phage control
Control_ECRC98_WM
+0.1
+0.1
+0.1
-0.1
-0.0
phage
WM_JK45
-0.0
-0.1
+0.2
+0.2
-0.0
phage
WM_EV240
-0.0
+0.1
-0.1
+0.1
+0.3
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