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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
uspB and pitA are separated by 70 nucleotides
pitA and yhiN are separated by 231 nucleotides
yhiN and yhiM are separated by 316 nucleotides
yhiM and JDDGAC_20085 are separated by 383 nucleotides
JDDGAC_20065: uspB - universal stress protein UspB, at 3,843,958 to 3,844,293
uspB
JDDGAC_20070: pitA - inorganic phosphate transporter PitA, at 3,844,364 to 3,845,863
pitA
JDDGAC_20075: yhiN - Uncharacterized protein YhiN, at 3,846,095 to 3,847,297
yhiN
JDDGAC_20080: yhiM - Inner membrane protein YhiM, at 3,847,614 to 3,848,666
yhiM
JDDGAC_20085: JDDGAC_20085 - DUF4049 domain-containing protein, at 3,849,050 to 3,850,660
_20085
Group
Condition
JDDGAC
_20065
JDDGAC
_20070
JDDGAC
_20075
JDDGAC
_20080
JDDGAC
_20085
uspB
pitA
yhiN
yhiM
phage
WM_K30
-0.0
-1.0
+0.2
-0.0
-0.1
phage
WM_JK45
-0.3
-0.4
-0.4
-0.0
+0.1
phage
WM_JK32
-0.2
-0.5
+0.1
-0.1
-0.1
phage
WM_Bas31
-0.1
-0.6
+0.2
+0.0
-0.1
no phage control
Control_ECRC98_WM
-0.2
-0.6
+0.0
-0.0
+0.0
phage
WM_Bas09
-0.1
-0.1
-0.4
-0.1
+0.1
no phage control
Control_ECRC98_WM
+0.0
-0.4
-0.0
-0.1
-0.0
no phage control
Control_ECRC98_WM
-0.1
-0.5
+0.4
-0.0
-0.2
phage
WM_JK45
-0.1
+0.0
-0.1
-0.1
-0.1
phage
WM_K30
-0.1
-0.3
+0.1
-0.1
+0.1
phage
WM_TP12
+0.1
-0.6
+0.1
-0.0
+0.1
no phage control
Control_ECRC98_WM
-0.1
-0.2
-0.1
-0.1
+0.2
phage
WM_JK32
-0.0
-0.5
+0.3
+0.0
-0.0
phage
WM_TP12
-0.1
-0.3
+0.2
-0.1
+0.2
phage
WM_Bas31
+0.1
-0.1
-0.2
-0.0
+0.2
phage
WM_Bas09
-0.0
+0.1
+0.3
-0.1
+0.1
phage
WM_EV240
-0.1
+3.1
+0.5
-0.1
-0.5
phage
WM_EV240
-0.4
+3.4
+0.8
+0.1
-0.2
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