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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
yiaD and bisC are separated by 152 nucleotides
bisC and yiaC overlap by 32 nucleotides
yiaC and tag overlap by 4 nucleotides
tag and yhjY are separated by 157 nucleotides
JDDGAC_19655: yiaD - OmpA family lipoprotein, at 3,753,228 to 3,753,887
yiaD
JDDGAC_19660: bisC - biotin sulfoxide reductase, at 3,754,040 to 3,756,373
bisC
JDDGAC_19665: yiaC - N-acetyltransferase, at 3,756,342 to 3,756,782
yiaC
JDDGAC_19670: tag - DNA-3-methyladenine glycosylase I, at 3,756,779 to 3,757,342
tag
JDDGAC_19675: yhjY - Uncharacterized protein YhjY, at 3,757,500 to 3,758,198
yhjY
Group
Condition
JDDGAC
_19655
JDDGAC
_19660
JDDGAC
_19665
JDDGAC
_19670
JDDGAC
_19675
yiaD
bisC
yiaC
tag
yhjY
phage
WM_EV240
-0.2
-0.1
-0.6
-0.5
-0.1
phage
WM_TP12
-0.2
-0.1
-0.3
-0.4
-0.2
phage
WM_EV240
+0.2
-0.1
-0.5
-0.2
-0.1
phage
WM_JK45
+0.1
-0.0
+0.0
-0.6
+0.0
phage
WM_Bas31
-0.1
+0.0
+0.1
-0.3
+0.1
phage
WM_Bas09
-0.2
-0.1
+0.6
-0.2
-0.1
no phage control
Control_ECRC98_WM
+0.1
-0.1
-0.1
+0.3
-0.2
no phage control
Control_ECRC98_WM
+0.4
+0.0
+0.1
-0.4
-0.1
phage
WM_TP12
+0.2
-0.1
-0.0
+0.1
+0.0
phage
WM_JK32
+0.1
-0.1
+0.0
+0.2
-0.1
phage
WM_JK45
-0.1
-0.1
+0.3
-0.1
+0.2
phage
WM_K30
+0.2
-0.0
+0.0
+0.2
-0.2
phage
WM_JK32
+0.1
-0.1
+0.2
+0.0
+0.0
no phage control
Control_ECRC98_WM
+0.3
-0.0
+0.4
-0.1
-0.1
phage
WM_Bas31
+0.1
-0.0
+0.2
+0.1
+0.1
phage
WM_K30
+0.0
-0.1
+0.3
+0.1
+0.2
phage
WM_Bas09
+0.2
+0.2
+0.4
+0.1
+0.0
no phage control
Control_ECRC98_WM
+0.2
+0.1
+0.3
+0.3
+0.1
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