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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
rffA and rffC are separated by 4 nucleotides
rffC and rfbA overlap by 23 nucleotides
rfbA and rffG are separated by 18 nucleotides
rffG and wecC overlap by 1 nucleotides
JDDGAC_18170: rffA - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 3,448,308 to 3,449,438
rffA
JDDGAC_18175: rffC - dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase, at 3,449,443 to 3,450,117
rffC
JDDGAC_18180: rfbA - glucose-1-phosphate thymidylyltransferase RfbA, at 3,450,095 to 3,450,976
rfbA
JDDGAC_18185: rffG - dTDP-glucose 4,6-dehydratase, at 3,450,995 to 3,452,062
rffG
JDDGAC_18190: wecC - UDP-N-acetyl-D-mannosamine dehydrogenase, at 3,452,062 to 3,453,324
wecC
Group
Condition
JDDGAC
_18170
JDDGAC
_18175
JDDGAC
_18180
JDDGAC
_18185
JDDGAC
_18190
rffA
rffC
rfbA
rffG
wecC
phage
WM_JK45
-4.4
-3.6
-5.9
-5.1
-0.1
phage
WM_JK45
-4.1
-3.8
-4.8
-4.7
+0.2
phage
WM_TP12
-3.5
-3.9
-4.8
-4.6
+0.0
phage
WM_TP12
-2.3
-3.6
-4.6
-5.1
+0.2
phage
WM_JK32
-2.0
-2.9
-3.4
-5.8
+0.1
phage
WM_EV240
-4.4
-5.3
-3.6
-4.1
+3.6
phage
WM_EV240
-3.6
-4.3
-4.5
-4.3
+3.6
phage
WM_JK32
-2.5
-2.7
-3.1
-4.8
+0.3
no phage control
Control_ECRC98_WM
-0.2
-0.2
+0.0
-0.2
+0.0
no phage control
Control_ECRC98_WM
-0.2
-0.1
-0.0
-0.3
+0.2
phage
WM_Bas31
+0.1
-0.3
-0.3
+0.0
+0.2
phage
WM_Bas31
-0.2
-0.1
+0.2
-0.1
+0.2
no phage control
Control_ECRC98_WM
-0.0
-0.1
-0.0
+0.2
+0.1
phage
WM_K30
+0.1
-0.2
+0.2
+0.0
+0.1
no phage control
Control_ECRC98_WM
+0.3
-0.1
+0.1
-0.0
+0.0
phage
WM_Bas09
-0.0
+0.1
+0.2
-0.2
+0.3
phage
WM_K30
+0.2
+0.0
+0.2
+0.0
+0.1
phage
WM_Bas09
+0.2
+0.1
+0.0
-0.0
+0.4
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