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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
rffM and wzyE are separated by 2 nucleotides
wzyE and rffT overlap by 4 nucleotides
rffT and wzxE overlap by 4 nucleotides
wzxE and rffA are separated by 1 nucleotides
JDDGAC_18150: rffM - lipopolysaccharide N-acetylmannosaminouronosyltransferase, at 3,443,888 to 3,444,628
rffM
JDDGAC_18155: wzyE - ECA oligosaccharide polymerase, at 3,444,631 to 3,445,983
wzyE
JDDGAC_18160: rffT - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase, at 3,445,980 to 3,447,059
rffT
JDDGAC_18165: wzxE - lipid III flippase WzxE, at 3,447,056 to 3,448,306
wzxE
JDDGAC_18170: rffA - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 3,448,308 to 3,449,438
rffA
Group
Condition
JDDGAC
_18150
JDDGAC
_18155
JDDGAC
_18160
JDDGAC
_18165
JDDGAC
_18170
rffM
wzyE
rffT
wzxE
rffA
phage
WM_JK45
-0.0
N.D.
-1.9
N.D.
-4.1
phage
WM_JK45
-0.4
N.D.
-0.9
N.D.
-4.4
phage
WM_TP12
+0.1
N.D.
-1.9
N.D.
-3.5
phage
WM_TP12
+0.2
N.D.
-2.0
N.D.
-2.3
phage
WM_EV240
+4.1
N.D.
-3.4
N.D.
-4.4
phage
WM_JK32
-0.1
N.D.
-0.9
N.D.
-2.5
phage
WM_JK32
-0.0
N.D.
-0.7
N.D.
-2.0
phage
WM_EV240
+3.9
N.D.
-2.2
N.D.
-3.6
no phage control
Control_ECRC98_WM
+0.1
N.D.
-0.2
N.D.
-0.2
no phage control
Control_ECRC98_WM
-0.0
N.D.
-0.0
N.D.
-0.2
phage
WM_Bas31
+0.0
N.D.
+0.1
N.D.
-0.2
phage
WM_Bas31
-0.1
N.D.
-0.0
N.D.
+0.1
phage
WM_Bas09
+0.0
N.D.
+0.1
N.D.
-0.0
no phage control
Control_ECRC98_WM
+0.1
N.D.
+0.0
N.D.
-0.0
no phage control
Control_ECRC98_WM
+0.1
N.D.
-0.2
N.D.
+0.3
phage
WM_K30
-0.0
N.D.
+0.1
N.D.
+0.1
phage
WM_K30
+0.1
N.D.
+0.0
N.D.
+0.2
phage
WM_Bas09
-0.1
N.D.
+0.4
N.D.
+0.2
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