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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
fabY and dtd are separated by 44 nucleotides
dtd and yihY overlap by 4 nucleotides
yihY and yihX overlap by 7 nucleotides
yihX and csqR are separated by 98 nucleotides
JDDGAC_17620: fabY - fatty acid biosynthesis protein FabY, at 3,342,968 to 3,343,909
fabY
JDDGAC_17625: dtd - D-aminoacyl-tRNA deacylase, at 3,343,954 to 3,344,391
dtd
JDDGAC_17630: yihY - virulence factor BrkB family protein, at 3,344,388 to 3,345,260
yihY
JDDGAC_17635: yihX - glucose-1-phosphatase, at 3,345,254 to 3,345,853
yihX
JDDGAC_17640: csqR - HTH-type transcriptional repressor CsqR, at 3,345,952 to 3,346,737
csqR
Group
Condition
JDDGAC
_17620
JDDGAC
_17625
JDDGAC
_17630
JDDGAC
_17635
JDDGAC
_17640
fabY
dtd
yihY
yihX
csqR
phage
WM_Bas09
-0.3
-0.2
-0.3
-0.2
+0.1
no phage control
Control_ECRC98_WM
+0.1
-0.2
-0.1
+0.1
-0.2
no phage control
Control_ECRC98_WM
+0.0
+0.0
+0.1
-0.2
-0.3
phage
WM_EV240
+0.0
+0.0
+0.2
-0.7
+0.1
phage
WM_EV240
-0.2
+0.3
+0.2
-0.5
-0.0
phage
WM_Bas31
-0.2
-0.1
+0.1
+0.1
-0.1
phage
WM_K30
-0.0
-0.1
+0.1
+0.1
-0.2
phage
WM_JK32
+0.0
-0.1
+0.0
-0.1
+0.0
phage
WM_TP12
+0.0
+0.0
+0.0
-0.1
-0.1
phage
WM_JK45
-0.2
+0.0
-0.1
+0.1
+0.1
phage
WM_TP12
+0.1
-0.1
+0.1
-0.0
-0.1
phage
WM_Bas09
+0.3
-0.1
-0.0
-0.1
+0.0
no phage control
Control_ECRC98_WM
-0.0
+0.0
+0.2
-0.1
-0.1
no phage control
Control_ECRC98_WM
+0.0
+0.1
-0.0
+0.1
-0.1
phage
WM_JK45
+0.0
+0.1
+0.1
-0.1
+0.1
phage
WM_JK32
-0.0
+0.1
+0.2
+0.0
+0.0
phage
WM_Bas31
+0.1
-0.0
+0.1
+0.1
+0.0
phage
WM_K30
+0.2
+0.2
+0.2
-0.1
+0.0
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