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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
cdh and sbp are separated by 106 nucleotides
sbp and pfkA are separated by 318 nucleotides
pfkA and fieF are separated by 180 nucleotides
fieF and cpxP are separated by 148 nucleotides
JDDGAC_17440: cdh - CDP-diacylglycerol diphosphatase, at 3,307,333 to 3,308,088
cdh
JDDGAC_17445: sbp - sulfate/thiosulfate ABC transporter substrate-binding protein Sbp, at 3,308,195 to 3,309,184
sbp
JDDGAC_17455: pfkA - 6-phosphofructokinase, at 3,309,503 to 3,310,465
pfkA
JDDGAC_17460: fieF - CDF family cation-efflux transporter FieF, at 3,310,646 to 3,311,548
fieF
JDDGAC_17465: cpxP - cell-envelope stress modulator CpxP, at 3,311,697 to 3,312,197
cpxP
Group
Condition
JDDGAC
_17440
JDDGAC
_17445
JDDGAC
_17455
JDDGAC
_17460
JDDGAC
_17465
cdh
sbp
pfkA
fieF
cpxP
phage
WM_Bas09
-0.2
-0.0
-2.9
+0.0
-0.7
phage
WM_Bas09
-0.1
+0.2
-2.9
-0.1
+0.2
no phage control
Control_ECRC98_WM
+0.1
-0.1
-2.0
-0.1
-0.3
no phage control
Control_ECRC98_WM
-0.0
-0.1
-2.1
-0.0
+0.0
no phage control
Control_ECRC98_WM
+0.1
+0.1
-2.0
-0.1
+0.0
phage
WM_Bas31
-0.1
+0.0
-1.7
-0.0
+0.1
phage
WM_TP12
+0.2
-0.2
-1.6
+0.2
-0.1
phage
WM_K30
-0.0
+0.1
-1.3
-0.0
+0.1
phage
WM_JK45
+0.0
-0.3
-0.9
-0.0
+0.0
phage
WM_JK45
-0.1
+0.0
-1.3
+0.1
+0.3
phage
WM_K30
+0.2
-0.0
-0.9
+0.0
-0.1
phage
WM_TP12
+0.0
+0.2
-0.8
+0.1
-0.1
phage
WM_JK32
+0.1
-0.1
-0.9
+0.0
+0.2
no phage control
Control_ECRC98_WM
+0.2
+0.0
-0.7
-0.1
+0.0
phage
WM_JK32
+0.1
-0.2
-0.4
-0.1
+0.1
phage
WM_EV240
+0.3
+0.1
-0.9
+0.5
-0.3
phage
WM_Bas31
-0.0
+0.2
-0.5
+0.2
+0.3
phage
WM_EV240
+0.4
-0.1
+0.5
+0.5
-0.3
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