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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
thiG and thiH overlap by 4 nucleotides
thiH and JDDGAC_17035 are separated by 434 nucleotides
JDDGAC_17035 and rpoC are separated by 212 nucleotides
rpoC and rpoB_R687H are separated by 76 nucleotides
JDDGAC_17020: thiG - thiazole synthase, at 3,216,516 to 3,217,286
thiG
JDDGAC_17025: thiH - 2-iminoacetate synthase ThiH, at 3,217,283 to 3,218,416
thiH
JDDGAC_17035: JDDGAC_17035 - stationary phase growth adaptation protein, at 3,218,851 to 3,219,294
_17035
JDDGAC_17040: rpoC - DNA-directed RNA polymerase subunit beta', at 3,219,507 to 3,223,730
rpoC
JDDGAC_17045: rpoB_R687H - DNA-directed RNA polymerase subunit beta RpoB, at 3,223,807 to 3,227,835
_R687H
Group
Condition
JDDGAC
_17020
JDDGAC
_17025
JDDGAC
_17035
JDDGAC
_17040
JDDGAC
_17045
thiG
thiH
rpoC
rpoB_R687H
phage
WM_Bas09
-0.3
-0.4
-0.1
N.D.
N.D.
phage
WM_TP12
-0.3
-0.2
-0.0
N.D.
N.D.
phage
WM_JK45
+0.0
-0.2
-0.0
N.D.
N.D.
phage
WM_Bas31
+0.0
-0.2
+0.1
N.D.
N.D.
phage
WM_Bas09
+0.3
-0.2
-0.1
N.D.
N.D.
phage
WM_K30
+0.1
-0.1
-0.0
N.D.
N.D.
no phage control
Control_ECRC98_WM
+0.1
-0.1
-0.0
N.D.
N.D.
phage
WM_EV240
-0.2
+0.2
-0.0
N.D.
N.D.
phage
WM_EV240
-0.3
+0.1
+0.2
N.D.
N.D.
phage
WM_Bas31
+0.2
-0.1
+0.0
N.D.
N.D.
phage
WM_TP12
+0.2
-0.1
+0.2
N.D.
N.D.
phage
WM_JK32
+0.1
+0.1
+0.0
N.D.
N.D.
phage
WM_K30
+0.3
-0.0
-0.0
N.D.
N.D.
no phage control
Control_ECRC98_WM
+0.0
+0.2
+0.1
N.D.
N.D.
no phage control
Control_ECRC98_WM
+0.4
-0.0
-0.1
N.D.
N.D.
phage
WM_JK45
+0.4
-0.1
+0.1
N.D.
N.D.
phage
WM_JK32
+0.5
-0.0
+0.1
N.D.
N.D.
no phage control
Control_ECRC98_WM
+0.6
-0.2
+0.1
N.D.
N.D.
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