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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
yjbD and rluF are separated by 0 nucleotides
rluF and deoR are separated by 347 nucleotides
deoR and fabG are separated by 69 nucleotides
fabG and manX are separated by 9 nucleotides
JDDGAC_16810: yjbD - Uncharacterized protein YjbD, at 3,171,835 to 3,172,107
yjbD
JDDGAC_16815: rluF - 23S rRNA pseudouridine(2604) synthase RluF, at 3,172,108 to 3,172,980
rluF
JDDGAC_16820: deoR - Cro/Cl family transcriptional regulator, at 3,173,328 to 3,174,275
deoR
JDDGAC_16825: fabG - sorbitol-6-phosphate 2-dehydrogenase, at 3,174,345 to 3,175,151
fabG
JDDGAC_16830: manX - PTS sorbose transporter subunit IIA, at 3,175,161 to 3,175,568
manX
Group
Condition
JDDGAC
_16810
JDDGAC
_16815
JDDGAC
_16820
JDDGAC
_16825
JDDGAC
_16830
yjbD
rluF
deoR
fabG
manX
phage
WM_Bas09
-0.2
-0.3
+0.1
+0.0
-0.6
phage
WM_K30
-0.4
-0.1
-0.3
+0.1
-0.0
phage
WM_JK32
-0.2
-0.3
+0.2
+0.0
-0.2
phage
WM_EV240
+0.1
+0.0
-0.3
-0.2
-0.0
phage
WM_JK45
-0.1
+0.0
-0.2
-0.3
+0.1
no phage control
Control_ECRC98_WM
-0.0
-0.2
-0.0
-0.0
-0.1
phage
WM_JK32
-0.0
+0.1
-0.1
-0.2
+0.0
phage
WM_JK45
-0.3
-0.0
+0.2
+0.3
-0.4
phage
WM_TP12
+0.1
+0.1
-0.3
+0.1
-0.1
no phage control
Control_ECRC98_WM
-0.0
+0.1
+0.3
-0.0
-0.4
phage
WM_Bas09
+0.2
+0.1
+0.1
+0.1
-0.5
phage
WM_Bas31
+0.2
-0.0
+0.2
-0.4
+0.2
phage
WM_EV240
+0.4
-0.1
+0.1
-0.1
-0.3
phage
WM_Bas31
+0.2
-0.1
+0.3
+0.2
-0.3
no phage control
Control_ECRC98_WM
+0.2
+0.2
-0.2
+0.1
+0.1
phage
WM_K30
+0.2
-0.0
+0.1
-0.2
+0.2
phage
WM_TP12
+0.2
+0.1
-0.1
-0.0
+0.3
no phage control
Control_ECRC98_WM
+0.3
+0.5
-0.1
-0.1
+0.2
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