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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
nrfF and nrfF overlap by 8 nucleotides
nrfF and nrfD are separated by 115 nucleotides
nrfD and nrfC overlap by 4 nucleotides
nrfC and nrfB overlap by 4 nucleotides
JDDGAC_16430: nrfF - heme lyase NrfEFG subunit NrfF, at 3,099,177 to 3,099,560
nrfF
JDDGAC_16435: nrfF - heme lyase NrfEFG subunit NrfF, at 3,099,553 to 3,101,175
nrfF
JDDGAC_16440: nrfD - cytochrome c nitrite reductase subunit NrfD, at 3,101,291 to 3,102,247
nrfD
JDDGAC_16445: nrfC - cytochrome c nitrite reductase Fe-S protein, at 3,102,244 to 3,102,915
nrfC
JDDGAC_16450: nrfB - cytochrome c nitrite reductase pentaheme subunit, at 3,102,912 to 3,103,478
nrfB
Group
Condition
JDDGAC
_16430
JDDGAC
_16435
JDDGAC
_16440
JDDGAC
_16445
JDDGAC
_16450
nrfF
nrfF
nrfD
nrfC
nrfB
phage
WM_TP12
-0.0
-0.0
-0.2
-0.2
-0.1
phage
WM_Bas09
+0.1
+0.1
-0.3
-0.4
-0.1
no phage control
Control_ECRC98_WM
+0.0
+0.0
-0.2
-0.2
+0.2
no phage control
Control_ECRC98_WM
+0.1
-0.1
-0.2
-0.1
-0.0
no phage control
Control_ECRC98_WM
-0.0
-0.0
+0.1
-0.3
-0.0
phage
WM_Bas09
+0.0
+0.2
-0.1
-0.3
-0.1
phage
WM_Bas31
+0.1
-0.0
-0.1
-0.2
-0.0
phage
WM_EV240
-0.3
-0.3
+0.2
+0.1
+0.1
phage
WM_K30
+0.2
+0.0
-0.3
-0.2
+0.2
phage
WM_TP12
-0.1
+0.0
+0.1
-0.0
+0.1
phage
WM_EV240
+0.1
-0.1
+0.3
-0.3
+0.0
phage
WM_K30
+0.2
+0.0
+0.0
-0.0
-0.1
phage
WM_JK45
-0.2
+0.2
-0.2
+0.3
+0.0
no phage control
Control_ECRC98_WM
+0.2
-0.1
+0.1
-0.0
+0.1
phage
WM_JK32
+0.2
-0.1
-0.1
+0.3
-0.0
phage
WM_JK45
+0.1
-0.0
-0.1
+0.3
+0.1
phage
WM_Bas31
+0.1
+0.0
+0.3
-0.1
+0.1
phage
WM_JK32
+0.2
+0.1
-0.1
+0.1
+0.3
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JDDGAC_16440
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