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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ydaE and fba are separated by 14 nucleotides
fba and rbsK overlap by 4 nucleotides
rbsK and ompR overlap by 4 nucleotides
ompR and yjcS are separated by 290 nucleotides
JDDGAC_16360: ydaE - D-lyxose/D-mannose isomerase, at 3,083,039 to 3,083,722
ydaE
JDDGAC_16365: fba - ketose 1,6-bisphosphate aldolase, at 3,083,737 to 3,084,597
fba
JDDGAC_16370: rbsK - sugar kinase, at 3,084,594 to 3,085,595
rbsK
JDDGAC_16375: ompR - DNA-binding response regulator, at 3,085,592 to 3,086,299
ompR
JDDGAC_16380: yjcS - alkyl sulfatase YjcS, at 3,086,590 to 3,088,575
yjcS
Group
Condition
JDDGAC
_16360
JDDGAC
_16365
JDDGAC
_16370
JDDGAC
_16375
JDDGAC
_16380
ydaE
fba
rbsK
ompR
yjcS
no phage control
Control_ECRC98_WM
-0.3
-0.0
-0.2
-0.8
-0.1
no phage control
Control_ECRC98_WM
+0.1
-0.0
-0.3
-0.8
+0.0
phage
WM_JK45
-0.1
-0.0
+0.1
-0.5
+0.1
phage
WM_K30
+0.2
-0.1
-0.0
-0.5
+0.0
phage
WM_Bas31
+0.0
-0.0
+0.1
-0.5
+0.1
phage
WM_Bas09
+0.2
+0.1
-0.0
-0.5
-0.0
phage
WM_JK32
-0.4
-0.1
-0.0
+0.3
+0.0
phage
WM_Bas31
-0.1
-0.1
+0.1
+0.1
+0.0
no phage control
Control_ECRC98_WM
-0.1
+0.0
-0.1
-0.1
+0.1
phage
WM_EV240
-0.6
+0.2
+0.0
+0.3
+0.2
phage
WM_K30
+0.0
-0.1
-0.0
+0.1
+0.2
phage
WM_Bas09
+0.3
+0.3
-0.2
-0.2
+0.1
phage
WM_JK45
+0.1
+0.2
-0.1
+0.1
-0.0
phage
WM_TP12
+0.1
+0.1
+0.1
-0.1
+0.2
phage
WM_JK32
+0.2
+0.0
-0.0
+0.1
+0.1
phage
WM_TP12
+0.2
+0.3
+0.0
+0.2
+0.0
no phage control
Control_ECRC98_WM
+0.3
+0.2
+0.1
+0.3
-0.0
phage
WM_EV240
+0.4
+0.2
-0.1
+0.4
+0.1
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