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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
rraB and argF are separated by 161 nucleotides
argF and JDDGAC_15480 are separated by 56 nucleotides
JDDGAC_15480 and tabA are separated by 122 nucleotides
tabA and bdcR are separated by 144 nucleotides
JDDGAC_15470: rraB - ribonuclease E inhibitor RraB, at 2,911,504 to 2,911,920
rraB
JDDGAC_15475: argF - ornithine carbamoyltransferase, at 2,912,082 to 2,913,086
argF
JDDGAC_15480: JDDGAC_15480 - Uncharacterized protein YjgL, at 2,913,143 to 2,914,915
_15480
JDDGAC_15485: tabA - toxin-antitoxin biofilm protein TabA, at 2,915,038 to 2,915,490
tabA
JDDGAC_15490: bdcR - HTH-type transcriptional repressor BdcR, at 2,915,635 to 2,916,228
bdcR
Group
Condition
JDDGAC
_15470
JDDGAC
_15475
JDDGAC
_15480
JDDGAC
_15485
JDDGAC
_15490
rraB
argF
tabA
bdcR
no phage control
Control_ECRC98_WM
-0.3
-1.6
-0.2
-0.2
+0.0
no phage control
Control_ECRC98_WM
-0.3
-1.5
+0.3
-0.8
+0.2
no phage control
Control_ECRC98_WM
-0.0
-1.5
+0.1
-0.1
-0.2
phage
WM_JK45
-0.1
-0.3
+0.2
-0.5
-0.2
phage
WM_EV240
-0.1
-0.5
+0.1
-0.0
-0.1
phage
WM_Bas09
+0.2
-0.4
-0.8
+0.3
+0.4
phage
WM_JK32
+0.0
+0.2
+0.0
-0.8
+0.2
phage
WM_JK32
-0.1
-0.1
-0.1
+0.2
-0.3
phage
WM_TP12
+0.1
-0.0
-0.2
-0.0
-0.2
no phage control
Control_ECRC98_WM
+0.0
-1.2
+0.2
+0.6
+0.1
phage
WM_Bas31
+0.3
-0.2
-0.3
+0.1
-0.1
phage
WM_K30
-0.3
+0.2
-0.3
+0.3
-0.1
phage
WM_TP12
-0.1
-0.4
-0.0
+0.4
-0.0
phage
WM_Bas09
-0.3
-0.3
+0.5
-0.2
+0.2
phage
WM_K30
-0.1
+0.3
-0.2
-0.1
+0.1
phage
WM_Bas31
-0.1
-0.3
+0.3
+0.2
+0.1
phage
WM_EV240
+0.4
-0.3
+0.1
-0.3
+0.3
phage
WM_JK45
+0.1
+0.4
+0.3
-0.2
-0.0
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