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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
zorB and zorE are separated by 3 nucleotides
zorE and nanM are separated by 245 nucleotides
nanM and JDDGAC_15310 overlap by 14 nucleotides
JDDGAC_15310 and fimB are separated by 459 nucleotides
JDDGAC_15295: zorB - Zorya protein ZorB, at 2,882,401 to 2,883,108
zorB
JDDGAC_15300: zorE - Zorya protein ZorE, at 2,883,112 to 2,884,215
zorE
JDDGAC_15305: nanM - N-acetylneuraminic acid mutarotase, at 2,884,461 to 2,884,769
nanM
JDDGAC_15310: JDDGAC_15310 - HNH endonuclease, at 2,884,756 to 2,885,607
_15310
JDDGAC_15315: fimB - integrase, at 2,886,067 to 2,886,894
fimB
Group
Condition
JDDGAC
_15295
JDDGAC
_15300
JDDGAC
_15305
JDDGAC
_15310
JDDGAC
_15315
zorB
zorE
nanM
fimB
phage
WM_JK32
-0.7
-0.1
+0.1
-0.1
-0.1
phage
WM_Bas09
-0.4
+0.3
-0.4
-0.2
+0.1
phage
WM_JK32
-0.4
+0.3
-0.3
-0.1
-0.0
phage
WM_JK45
-0.2
-0.1
+0.1
-0.2
-0.2
no phage control
Control_ECRC98_WM
-0.4
-0.2
-0.0
+0.0
+0.1
phage
WM_TP12
-0.0
-0.0
-0.2
+0.0
-0.1
phage
WM_Bas31
-0.3
-0.1
+0.2
+0.0
-0.0
phage
WM_TP12
-0.2
+0.1
+0.0
-0.0
-0.1
phage
WM_K30
-0.4
+0.0
+0.3
+0.0
-0.1
no phage control
Control_ECRC98_WM
+0.3
+0.1
-0.4
-0.1
+0.1
phage
WM_JK45
+0.1
-0.1
-0.0
-0.0
+0.1
phage
WM_Bas31
+0.2
-0.2
+0.2
-0.0
+0.1
no phage control
Control_ECRC98_WM
+0.6
+0.1
-0.8
+0.4
+0.2
phage
WM_EV240
+0.4
-0.4
+0.6
-0.1
-0.1
phage
WM_K30
+0.1
+0.1
+0.3
+0.2
+0.0
no phage control
Control_ECRC98_WM
+0.2
+0.2
+0.1
+0.0
+0.3
phage
WM_Bas09
+0.4
+0.3
+0.1
-0.1
+0.1
phage
WM_EV240
+0.0
-0.2
+0.9
+0.3
-0.2
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