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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
iadA and iadA are separated by 12 nucleotides
iadA and hypT are separated by 247 nucleotides
hypT and iraD overlap by 8 nucleotides
iraD and idlP overlap by 4 nucleotides
JDDGAC_15115: iadA - beta-aspartyl-peptidase, at 2,829,593 to 2,830,054
iadA
JDDGAC_15120: iadA - beta-aspartyl-peptidase, at 2,830,067 to 2,831,239
iadA
JDDGAC_15125: hypT - hypochlorite stress DNA-binding transcriptional regulator HypT, at 2,831,487 to 2,832,215
hypT
JDDGAC_15130: iraD - anti-adapter protein IraD, at 2,832,208 to 2,832,600
iraD
JDDGAC_15135: idlP - iraD leader peptide, at 2,832,597 to 2,832,680
idlP
Group
Condition
JDDGAC
_15115
JDDGAC
_15120
JDDGAC
_15125
JDDGAC
_15130
JDDGAC
_15135
iadA
iadA
hypT
iraD
idlP
phage
WM_Bas09
-0.0
-0.3
+0.1
-0.4
+0.0
no phage control
Control_ECRC98_WM
-0.0
-0.0
-0.2
+0.2
-0.5
phage
WM_JK45
-0.3
-0.1
-0.4
+0.3
+0.1
phage
WM_JK32
+0.1
-0.0
-0.1
+0.0
-0.4
phage
WM_K30
-0.1
-0.0
-0.6
-0.1
+0.6
phage
WM_JK45
-0.0
-0.2
-0.3
+0.2
+0.1
phage
WM_EV240
-0.2
-0.6
+0.3
+0.1
+0.3
phage
WM_JK32
+0.0
-0.3
-0.3
+0.4
-0.0
no phage control
Control_ECRC98_WM
-0.2
-0.1
-0.1
+0.1
+0.2
no phage control
Control_ECRC98_WM
+0.1
+0.1
-0.2
+0.1
-0.2
no phage control
Control_ECRC98_WM
+0.1
-0.3
+0.1
-0.1
+0.2
phage
WM_K30
+0.1
+0.1
-0.1
-0.2
+0.5
phage
WM_Bas31
+0.0
-0.1
+0.3
-0.1
+0.2
phage
WM_Bas09
-0.2
+0.2
-0.5
+0.6
+0.4
phage
WM_EV240
-0.3
+0.4
+0.1
-0.2
+0.7
phage
WM_Bas31
+0.1
+0.2
-0.1
+0.6
+0.4
phage
WM_TP12
+0.1
+0.4
+0.0
+0.8
-0.1
phage
WM_TP12
+0.0
+0.2
-0.1
+0.5
+0.6
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