Fitness for 5 genes in Escherichia coli ECRC98

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500 ntlptD and surA are separated by 52 nucleotidessurA and pdxA overlap by 1 nucleotidespdxA and rsmA overlap by 4 nucleotidesrsmA and apaG are separated by 2 nucleotides JDDGAC_14415: lptD - LPS assembly protein LptD, at 2,683,905 to 2,686,259 lptD JDDGAC_14420: surA - peptidylprolyl isomerase SurA, at 2,686,312 to 2,687,598 surA JDDGAC_14425: pdxA - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 2,687,598 to 2,688,587 pdxA JDDGAC_14430: rsmA - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA, at 2,688,584 to 2,689,405 rsmA JDDGAC_14435: apaG - Co2+/Mg2+ efflux protein ApaG, at 2,689,408 to 2,689,785 apaG
Group Condition JDDGAC_14415 JDDGAC_14420 JDDGAC_14425 JDDGAC_14430 JDDGAC_14435
lptD surA pdxA rsmA apaG
no phage control Control_ECRC98_WM N.D. -2.3 -0.0 -3.0 -0.2
phage WM_Bas09 N.D. -2.9 -0.1 -0.2 -1.4
phage WM_Bas09 N.D. -0.4 -0.1 -3.7 -0.2
no phage control Control_ECRC98_WM N.D. -2.4 +0.4 -2.0 -0.2
phage WM_Bas31 N.D. -3.3 -0.0 -0.5 -0.1
phage WM_TP12 N.D. -2.1 +0.0 -1.6 -0.2
phage WM_Bas31 N.D. -0.9 +0.0 -1.2 -1.5
phage WM_JK45 N.D. -0.9 +0.0 -1.4 -1.2
phage WM_K30 N.D. -2.7 +0.1 +0.1 -0.5
phage WM_TP12 N.D. -0.5 +0.0 -1.5 -0.8
phage WM_JK32 N.D. -0.7 +0.3 -1.7 -0.4
no phage control Control_ECRC98_WM N.D. -0.8 +0.1 -0.7 -0.9
phage WM_JK45 N.D. +0.8 +0.0 +0.7 -3.9
phage WM_K30 N.D. -0.8 -0.0 -0.8 -0.5
phage WM_JK32 N.D. -1.3 -0.1 -0.2 +0.1
no phage control Control_ECRC98_WM N.D. -0.2 +0.1 -0.5 -0.2
phage WM_EV240 N.D. +3.4 +0.3 +2.3 +3.5
phage WM_EV240 N.D. +3.0 +0.5 +2.8 +3.3
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