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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
map and glnD are separated by 61 nucleotides
glnD and dapD are separated by 30 nucleotides
dapD and yaeH are separated by 314 nucleotides
yaeH and cdaR are separated by 88 nucleotides
JDDGAC_13825: map - type I methionyl aminopeptidase, at 2,552,991 to 2,553,785
map
JDDGAC_13830: glnD - bifunctional uridylyltransferase/uridylyl-removing protein GlnD, at 2,553,847 to 2,556,519
glnD
JDDGAC_13835: dapD - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 2,556,550 to 2,557,374
dapD
JDDGAC_13840: yaeH - DUF3461 domain-containing protein, at 2,557,689 to 2,558,075
yaeH
JDDGAC_13845: cdaR - DNA-binding transcriptional regulator CdaR, at 2,558,164 to 2,559,321
cdaR
Group
Condition
JDDGAC
_13825
JDDGAC
_13830
JDDGAC
_13835
JDDGAC
_13840
JDDGAC
_13845
map
glnD
dapD
yaeH
cdaR
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
-0.2
-0.3
phage
WM_Bas09
N.D.
N.D.
N.D.
-0.4
+0.1
phage
WM_Bas09
N.D.
N.D.
N.D.
-0.3
+0.0
phage
WM_EV240
N.D.
N.D.
N.D.
-0.0
-0.2
phage
WM_K30
N.D.
N.D.
N.D.
-0.2
-0.1
phage
WM_JK45
N.D.
N.D.
N.D.
-0.1
-0.1
phage
WM_TP12
N.D.
N.D.
N.D.
-0.2
+0.2
phage
WM_JK32
N.D.
N.D.
N.D.
-0.0
+0.0
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
-0.0
+0.0
phage
WM_JK32
N.D.
N.D.
N.D.
-0.2
+0.2
phage
WM_K30
N.D.
N.D.
N.D.
+0.1
-0.0
phage
WM_Bas31
N.D.
N.D.
N.D.
-0.0
+0.1
phage
WM_Bas31
N.D.
N.D.
N.D.
-0.0
+0.2
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
+0.1
+0.1
phage
WM_TP12
N.D.
N.D.
N.D.
-0.0
+0.3
no phage control
Control_ECRC98_WM
N.D.
N.D.
N.D.
+0.0
+0.3
phage
WM_JK45
N.D.
N.D.
N.D.
-0.1
+0.4
phage
WM_EV240
N.D.
N.D.
N.D.
+0.4
-0.0
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