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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
yaeF and nlpE are separated by 199 nucleotides
nlpE and arfB are separated by 13 nucleotides
arfB and yaeQ overlap by 4 nucleotides
yaeQ and yaeP are separated by 165 nucleotides
JDDGAC_13675: yaeF - YaeF family permuted papain-like enzyme, at 2,525,648 to 2,526,472
yaeF
JDDGAC_13685: nlpE - envelope stress response activation lipoprotein NlpE, at 2,526,672 to 2,527,382
nlpE
JDDGAC_13690: arfB - aminoacyl-tRNA hydrolase, at 2,527,396 to 2,527,806
arfB
JDDGAC_13695: yaeQ - Uncharacterized protein YaeQ, at 2,527,803 to 2,528,348
yaeQ
JDDGAC_13700: yaeP - YaeP family protein, at 2,528,514 to 2,528,714
yaeP
Group
Condition
JDDGAC
_13675
JDDGAC
_13685
JDDGAC
_13690
JDDGAC
_13695
JDDGAC
_13700
yaeF
nlpE
arfB
yaeQ
yaeP
phage
WM_JK45
+0.0
-0.3
+0.2
-0.1
-0.2
phage
WM_K30
-0.4
+0.1
-0.1
+0.1
+0.1
phage
WM_EV240
-0.0
-0.3
+0.3
+0.1
-0.2
phage
WM_EV240
+0.2
-0.3
+0.4
-0.2
+0.0
phage
WM_JK45
-0.1
-0.2
+0.3
+0.2
-0.1
phage
WM_TP12
+0.0
+0.1
-0.1
+0.2
+0.0
phage
WM_Bas31
-0.0
+0.0
+0.3
+0.1
-0.1
no phage control
Control_ECRC98_WM
+0.0
+0.2
-0.1
+0.1
+0.0
no phage control
Control_ECRC98_WM
-0.1
-0.1
+0.4
+0.5
-0.4
no phage control
Control_ECRC98_WM
+0.1
-0.3
+0.0
-0.2
+0.6
phage
WM_Bas09
-0.0
-0.2
+0.4
+0.3
-0.2
phage
WM_JK32
+0.1
-0.1
-0.0
+0.4
+0.2
phage
WM_Bas09
+0.2
-0.1
-0.0
+0.5
-0.2
phage
WM_TP12
+0.1
+0.1
+0.0
+0.1
+0.2
phage
WM_Bas31
+0.5
+0.2
-0.3
+0.2
-0.0
phage
WM_JK32
-0.1
+0.2
+0.0
+0.2
+0.6
phage
WM_K30
+0.2
+0.1
+0.2
+0.0
+0.4
no phage control
Control_ECRC98_WM
-0.0
+0.2
+0.3
+0.4
+0.4
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