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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
JDDGAC_12840 and ykgK,ecpR are separated by 824 nucleotides
ykgK,ecpR and ecpA are separated by 74 nucleotides
ecpA and ecpB are separated by 57 nucleotides
ecpB and ecpC are separated by 25 nucleotides
JDDGAC_12840: JDDGAC_12840 - Protein, at 2,380,226 to 2,380,417
_12840
JDDGAC_12845: ykgK,ecpR - regulator protein EcpR, at 2,381,242 to 2,381,784
ykgK,ecpR
JDDGAC_12850: ecpA - common pilus major fimbrillin subunit EcpA, at 2,381,859 to 2,382,446
ecpA
JDDGAC_12855: ecpB - fimbrial chaperone EcpB, at 2,382,504 to 2,383,172
ecpB
JDDGAC_12860: ecpC - fimbrial usher EcpC, at 2,383,198 to 2,385,723
ecpC
Group
Condition
JDDGAC
_12840
JDDGAC
_12845
JDDGAC
_12850
JDDGAC
_12855
JDDGAC
_12860
ykgK,ecpR
ecpA
ecpB
ecpC
phage
WM_Bas31
-0.5
-0.4
-0.5
+0.2
-0.1
phage
WM_TP12
-0.6
-0.0
+0.1
-0.2
-0.1
phage
WM_K30
-0.2
-0.1
-0.4
+0.2
-0.1
phage
WM_TP12
-0.4
-0.0
-0.1
-0.0
-0.0
phage
WM_JK32
-0.2
+0.3
-0.1
-0.3
-0.1
phage
WM_JK45
-0.0
-0.2
+0.1
-0.2
-0.1
no phage control
Control_ECRC98_WM
-0.4
+0.2
+0.1
-0.0
-0.1
phage
WM_Bas09
-0.7
+0.4
-0.0
+0.3
-0.1
phage
WM_JK32
-0.1
+0.3
+0.1
-0.3
-0.1
phage
WM_Bas09
-0.2
+0.2
-0.1
+0.1
-0.1
no phage control
Control_ECRC98_WM
+0.2
+0.1
-0.2
-0.0
+0.1
phage
WM_K30
-0.1
+0.5
-0.1
-0.1
-0.1
no phage control
Control_ECRC98_WM
+0.0
+0.5
+0.0
-0.3
-0.0
no phage control
Control_ECRC98_WM
+0.0
+0.4
-0.2
-0.0
-0.0
phage
WM_EV240
-0.4
+0.1
+0.8
-0.1
-0.1
phage
WM_Bas31
+0.1
-0.1
+0.1
+0.3
+0.0
phage
WM_JK45
+0.5
+0.1
+0.3
-0.0
-0.1
phage
WM_EV240
+0.3
+0.7
+0.7
-0.7
-0.1
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