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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
cyoE and yajR are separated by 148 nucleotides
yajR and yajQ are separated by 127 nucleotides
yajQ and panE are separated by 167 nucleotides
panE and yajL overlap by 38 nucleotides
JDDGAC_12035: cyoE - heme o synthase, at 2,211,180 to 2,212,070
cyoE
JDDGAC_12040: yajR - Inner membrane transport protein YajR, at 2,212,219 to 2,213,583
yajR
JDDGAC_12045: yajQ - nucleotide binding protein YajQ, at 2,213,711 to 2,214,202
yajQ
JDDGAC_12050: panE - 2-dehydropantoate 2-reductase, at 2,214,370 to 2,215,281
panE
JDDGAC_12055: yajL - protein deglycase YajL, at 2,215,244 to 2,215,834
yajL
Group
Condition
JDDGAC
_12035
JDDGAC
_12040
JDDGAC
_12045
JDDGAC
_12050
JDDGAC
_12055
cyoE
yajR
yajQ
panE
yajL
phage
WM_EV240
-0.3
+0.0
+0.5
+0.4
-1.5
phage
WM_EV240
-0.1
-0.2
+0.0
+0.6
-1.2
phage
WM_TP12
-0.2
-0.1
-0.4
-0.0
+0.2
no phage control
Control_ECRC98_WM
-0.1
-0.1
+0.1
+0.1
-0.4
phage
WM_TP12
-0.0
-0.2
-0.1
+0.1
-0.1
phage
WM_Bas09
-0.4
-0.5
-0.1
+0.1
+0.5
no phage control
Control_ECRC98_WM
+0.1
-0.4
+0.3
-0.1
-0.3
phage
WM_K30
-0.2
-0.2
+0.3
-0.1
-0.0
phage
WM_Bas31
-0.0
-0.0
+0.1
+0.2
-0.5
phage
WM_JK32
-0.2
+0.1
+0.1
+0.0
-0.1
phage
WM_JK32
-0.4
-0.3
+0.5
+0.1
+0.2
no phage control
Control_ECRC98_WM
+0.1
-0.0
+0.1
-0.0
-0.1
phage
WM_JK45
-0.4
-0.0
+0.5
-0.0
+0.0
phage
WM_JK45
-0.1
-0.1
+0.1
+0.3
+0.1
no phage control
Control_ECRC98_WM
-0.1
+0.2
+0.1
+0.1
+0.1
phage
WM_Bas09
-0.4
-0.4
+0.6
+0.1
+0.6
phage
WM_K30
-0.1
+0.1
+0.6
-0.1
-0.0
phage
WM_Bas31
+0.1
-0.1
+0.6
+0.0
-0.1
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