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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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500 nt
recR and ybaB overlap by 1 nucleotides
ybaB and dnaX are separated by 52 nucleotides
dnaX and apt are separated by 128 nucleotides
apt and ybaN are separated by 152 nucleotides
JDDGAC_11805: recR - recombination mediator RecR, at 2,164,032 to 2,164,637
recR
JDDGAC_11810: ybaB - YbaB/EbfC family nucleoid-associated protein, at 2,164,637 to 2,164,966
ybaB
JDDGAC_11815: dnaX - DNA polymerase III subunit gamma/tau, at 2,165,019 to 2,166,950
dnaX
JDDGAC_11820: apt - adenine phosphoribosyltransferase, at 2,167,079 to 2,167,630
apt
JDDGAC_11825: ybaN - DUF454 domain-containing protein, at 2,167,783 to 2,168,160
ybaN
Group
Condition
JDDGAC
_11805
JDDGAC
_11810
JDDGAC
_11815
JDDGAC
_11820
JDDGAC
_11825
recR
ybaB
dnaX
apt
ybaN
phage
WM_Bas31
-0.1
N.D.
N.D.
-0.8
-0.3
no phage control
Control_ECRC98_WM
-0.4
N.D.
N.D.
-0.1
-0.1
no phage control
Control_ECRC98_WM
-0.0
N.D.
N.D.
-0.6
+0.0
phage
WM_JK32
-1.0
N.D.
N.D.
+0.5
-0.0
phage
WM_JK45
+0.2
N.D.
N.D.
-0.5
-0.1
phage
WM_Bas31
-0.1
N.D.
N.D.
-0.2
-0.2
phage
WM_Bas09
-0.5
N.D.
N.D.
+0.2
-0.0
phage
WM_TP12
+0.2
N.D.
N.D.
-0.2
-0.2
no phage control
Control_ECRC98_WM
-0.4
N.D.
N.D.
+0.4
-0.2
phage
WM_K30
-0.1
N.D.
N.D.
-0.1
+0.1
no phage control
Control_ECRC98_WM
-0.1
N.D.
N.D.
+0.0
+0.1
phage
WM_TP12
+0.5
N.D.
N.D.
-0.3
-0.1
phage
WM_K30
+0.0
N.D.
N.D.
+0.1
+0.0
phage
WM_JK32
+0.1
N.D.
N.D.
+0.3
-0.0
phage
WM_JK45
+0.2
N.D.
N.D.
+0.6
-0.1
phage
WM_Bas09
+0.3
N.D.
N.D.
+0.3
+0.1
phage
WM_EV240
+0.3
N.D.
N.D.
+0.3
+0.1
phage
WM_EV240
+1.6
N.D.
N.D.
+1.3
-0.0
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