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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ylbF and ylbE are separated by 10 nucleotides
ylbE and fdrA are separated by 9 nucleotides
fdrA and allD are separated by 316 nucleotides
allD and allC are separated by 21 nucleotides
JDDGAC_11500: ylbF - Uncharacterized protein YlbF, at 2,082,296 to 2,083,111
ylbF
JDDGAC_11505: ylbE - Uncharacterized protein YlbE, at 2,083,122 to 2,084,381
ylbE
JDDGAC_11510: fdrA - Protein FdrA, at 2,084,391 to 2,086,058
fdrA
JDDGAC_11515: allD - ureidoglycolate dehydrogenase, at 2,086,375 to 2,087,424
allD
JDDGAC_11520: allC - allantoate deiminase, at 2,087,446 to 2,088,681
allC
Group
Condition
JDDGAC
_11500
JDDGAC
_11505
JDDGAC
_11510
JDDGAC
_11515
JDDGAC
_11520
ylbF
ylbE
fdrA
allD
allC
phage
WM_JK32
-0.3
-0.0
+0.1
-0.2
-0.2
phage
WM_JK45
-0.1
+0.3
-0.3
+0.0
-0.5
phage
WM_K30
-0.2
-0.0
+0.0
+0.1
-0.1
phage
WM_EV240
-0.0
-0.0
-0.1
-0.1
-0.0
no phage control
Control_ECRC98_WM
-0.2
+0.0
+0.3
+0.0
-0.4
phage
WM_Bas09
+0.1
+0.2
-0.1
-0.3
-0.1
phage
WM_JK45
-0.1
-0.2
+0.1
+0.0
-0.1
no phage control
Control_ECRC98_WM
-0.1
-0.1
+0.2
-0.1
-0.1
phage
WM_TP12
-0.0
+0.0
-0.0
-0.0
-0.1
phage
WM_TP12
+0.1
-0.1
+0.1
-0.0
-0.0
phage
WM_Bas31
-0.0
-0.1
+0.2
-0.1
+0.0
phage
WM_K30
+0.1
-0.1
-0.1
+0.1
+0.1
no phage control
Control_ECRC98_WM
+0.0
-0.2
-0.0
+0.1
+0.2
phage
WM_Bas09
+0.3
+0.2
+0.0
+0.2
-0.6
phage
WM_Bas31
-0.1
-0.0
+0.2
-0.1
+0.2
no phage control
Control_ECRC98_WM
-0.2
+0.3
-0.1
+0.2
+0.1
phage
WM_EV240
+0.1
+0.2
+0.0
+0.2
+0.3
phage
WM_JK32
+0.1
+0.4
+0.1
+0.1
+0.3
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