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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
fimC and fimA are separated by 219 nucleotides
fimA and JDDGAC_11455 are separated by 479 nucleotides
JDDGAC_11455 and ybcJ are separated by 1 nucleotides
ybcJ and ybcI are separated by 107 nucleotides
JDDGAC_11445: fimC - type 1 fimbria chaperone FimC, at 2,073,119 to 2,073,811
fimC
JDDGAC_11450: fimA - type 1 fimbrial major subunit FimA, at 2,074,031 to 2,074,573
fimA
JDDGAC_11455: JDDGAC_11455 - Bifunctional protein FolD, at 2,075,053 to 2,075,919
_11455
JDDGAC_11460: ybcJ - ribosome-associated protein YbcJ, at 2,075,921 to 2,076,133
ybcJ
JDDGAC_11465: ybcI - Inner membrane protein YbcI, at 2,076,241 to 2,076,762
ybcI
Group
Condition
JDDGAC
_11445
JDDGAC
_11450
JDDGAC
_11455
JDDGAC
_11460
JDDGAC
_11465
fimC
fimA
ybcJ
ybcI
phage
WM_EV240
-1.1
N.D.
N.D.
N.D.
+0.1
phage
WM_Bas09
-0.1
N.D.
N.D.
N.D.
-0.4
no phage control
Control_ECRC98_WM
-0.2
N.D.
N.D.
N.D.
-0.2
phage
WM_JK32
-0.0
N.D.
N.D.
N.D.
-0.2
no phage control
Control_ECRC98_WM
+0.0
N.D.
N.D.
N.D.
-0.2
phage
WM_TP12
-0.0
N.D.
N.D.
N.D.
-0.2
phage
WM_JK32
+0.0
N.D.
N.D.
N.D.
-0.2
phage
WM_K30
+0.0
N.D.
N.D.
N.D.
-0.1
phage
WM_K30
-0.1
N.D.
N.D.
N.D.
+0.0
phage
WM_JK45
+0.3
N.D.
N.D.
N.D.
-0.2
phage
WM_EV240
+0.3
N.D.
N.D.
N.D.
-0.2
phage
WM_TP12
+0.1
N.D.
N.D.
N.D.
+0.0
phage
WM_Bas31
+0.0
N.D.
N.D.
N.D.
+0.1
phage
WM_Bas09
+0.5
N.D.
N.D.
N.D.
-0.2
no phage control
Control_ECRC98_WM
+0.2
N.D.
N.D.
N.D.
+0.1
phage
WM_Bas31
+0.2
N.D.
N.D.
N.D.
+0.1
phage
WM_JK45
+0.3
N.D.
N.D.
N.D.
+0.0
no phage control
Control_ECRC98_WM
+0.3
N.D.
N.D.
N.D.
+0.2
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