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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
corC and lnt are separated by 24 nucleotides
lnt and gltI are separated by 396 nucleotides
gltI and gltJ are separated by 169 nucleotides
gltJ and gltK overlap by 1 nucleotides
JDDGAC_10885: corC - CNNM family magnesium/cobalt transport protein CorC, at 1,953,291 to 1,954,169
corC
JDDGAC_10890: lnt - apolipoprotein N-acyltransferase, at 1,954,194 to 1,955,732
lnt
JDDGAC_10895: gltI - glutamate/aspartate ABC transporter substrate-binding protein GltI, at 1,956,129 to 1,957,037
gltI
JDDGAC_10905: gltJ - glutamate/aspartate ABC transporter permease GltJ, at 1,957,207 to 1,957,947
gltJ
JDDGAC_10910: gltK - glutamate/aspartate ABC transporter permease GltK, at 1,957,947 to 1,958,621
gltK
Group
Condition
JDDGAC
_10885
JDDGAC
_10890
JDDGAC
_10895
JDDGAC
_10905
JDDGAC
_10910
corC
lnt
gltI
gltJ
gltK
no phage control
Control_ECRC98_WM
-0.3
N.D.
-0.4
+0.1
-0.5
no phage control
Control_ECRC98_WM
-0.4
N.D.
+0.2
-0.4
-0.2
phage
WM_K30
-0.2
N.D.
-0.0
+0.3
-0.6
phage
WM_JK45
-0.5
N.D.
+0.1
+0.0
+0.2
no phage control
Control_ECRC98_WM
-0.0
N.D.
+0.0
-0.2
+0.1
phage
WM_JK32
+0.5
N.D.
-0.1
-0.2
-0.2
no phage control
Control_ECRC98_WM
+0.2
N.D.
-0.0
+0.1
-0.2
phage
WM_JK32
+0.2
N.D.
+0.2
-0.0
-0.3
phage
WM_EV240
-1.2
N.D.
+0.2
+0.7
+0.4
phage
WM_JK45
+0.3
N.D.
-0.0
-0.1
+0.0
phage
WM_K30
+0.3
N.D.
+0.0
+0.1
-0.1
phage
WM_TP12
+0.6
N.D.
-0.1
-0.0
-0.1
phage
WM_EV240
+0.3
N.D.
-0.2
+0.1
+0.4
phage
WM_TP12
+0.4
N.D.
-0.2
+0.4
+0.0
phage
WM_Bas31
+0.4
N.D.
-0.2
+0.3
+0.3
phage
WM_Bas31
+0.7
N.D.
-0.2
+0.2
+0.3
phage
WM_Bas09
+1.3
N.D.
-0.3
+0.1
+0.0
phage
WM_Bas09
+2.1
N.D.
+0.4
+0.1
-0.4
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