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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ubiF and miaB are separated by 145 nucleotides
miaB and ybeZ are separated by 113 nucleotides
ybeZ and ybeY overlap by 4 nucleotides
ybeY and corC are separated by 89 nucleotides
JDDGAC_10865: ubiF - 3-demethoxyubiquinol 3-hydroxylase, at 1,948,799 to 1,949,974
ubiF
JDDGAC_10870: miaB - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 1,950,120 to 1,951,544
miaB
JDDGAC_10875: ybeZ - PhoH-like protein, at 1,951,658 to 1,952,737
ybeZ
JDDGAC_10880: ybeY - rRNA maturation RNase YbeY, at 1,952,734 to 1,953,201
ybeY
JDDGAC_10885: corC - CNNM family magnesium/cobalt transport protein CorC, at 1,953,291 to 1,954,169
corC
Group
Condition
JDDGAC
_10865
JDDGAC
_10870
JDDGAC
_10875
JDDGAC
_10880
JDDGAC
_10885
ubiF
miaB
ybeZ
ybeY
corC
phage
WM_EV240
N.D.
-1.3
+0.6
N.D.
-1.2
phage
WM_EV240
N.D.
-1.6
+0.5
N.D.
+0.3
phage
WM_K30
N.D.
-0.7
+0.3
N.D.
-0.2
no phage control
Control_ECRC98_WM
N.D.
-0.5
+0.3
N.D.
-0.4
phage
WM_JK45
N.D.
-0.0
+0.2
N.D.
-0.5
no phage control
Control_ECRC98_WM
N.D.
-0.4
+0.4
N.D.
-0.3
phage
WM_K30
N.D.
-0.5
+0.0
N.D.
+0.3
phage
WM_Bas31
N.D.
-0.6
+0.0
N.D.
+0.4
phage
WM_JK45
N.D.
-0.4
-0.0
N.D.
+0.3
phage
WM_Bas31
N.D.
-0.7
+0.0
N.D.
+0.7
no phage control
Control_ECRC98_WM
N.D.
-0.4
+0.2
N.D.
+0.2
phage
WM_TP12
N.D.
-0.6
+0.1
N.D.
+0.6
phage
WM_JK32
N.D.
-0.2
+0.1
N.D.
+0.2
phage
WM_TP12
N.D.
-0.5
+0.2
N.D.
+0.4
no phage control
Control_ECRC98_WM
N.D.
-0.2
+0.5
N.D.
-0.0
phage
WM_JK32
N.D.
-0.1
+0.2
N.D.
+0.5
phage
WM_Bas09
N.D.
-0.6
+0.1
N.D.
+1.3
phage
WM_Bas09
N.D.
-0.6
+0.5
N.D.
+2.1
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