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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ybhQ and ybhP are separated by 132 nucleotides
ybhP and clsB overlap by 4 nucleotides
clsB and ybhN overlap by 1 nucleotides
ybhN and ybhM are separated by 35 nucleotides
JDDGAC_09955: ybhQ - Inner membrane protein YbhQ, at 1,776,596 to 1,777,006
ybhQ
JDDGAC_09960: ybhP - Uncharacterized protein YbhP, at 1,777,139 to 1,777,900
ybhP
JDDGAC_09965: clsB - cardiolipin synthase ClsB, at 1,777,897 to 1,779,138
clsB
JDDGAC_09970: ybhN - Inner membrane protein YbhN, at 1,779,138 to 1,780,094
ybhN
JDDGAC_09975: ybhM - Uncharacterized protein YbhM, at 1,780,130 to 1,780,843
ybhM
Group
Condition
JDDGAC
_09955
JDDGAC
_09960
JDDGAC
_09965
JDDGAC
_09970
JDDGAC
_09975
ybhQ
ybhP
clsB
ybhN
ybhM
phage
WM_JK45
+0.0
-0.2
-0.3
-0.4
-0.3
phage
WM_Bas09
-0.3
-0.4
-0.2
-0.1
-0.1
phage
WM_Bas09
-0.0
+0.2
-0.3
+0.1
-0.9
no phage control
Control_ECRC98_WM
-0.7
-0.0
+0.0
+0.0
-0.2
phage
WM_EV240
-1.2
+0.2
+0.2
-0.1
+0.5
no phage control
Control_ECRC98_WM
-0.4
-0.0
+0.1
-0.3
+0.1
phage
WM_JK32
-0.1
-0.4
-0.0
-0.1
+0.3
no phage control
Control_ECRC98_WM
+0.1
+0.2
-0.1
-0.1
-0.3
phage
WM_TP12
-0.2
-0.1
+0.1
+0.0
+0.1
phage
WM_JK32
+0.2
-0.1
-0.0
-0.0
-0.1
phage
WM_EV240
-0.3
-0.1
-0.1
+0.1
+0.4
phage
WM_JK45
+0.3
-0.2
+0.0
-0.2
+0.2
phage
WM_TP12
-0.1
-0.0
-0.0
+0.1
+0.2
phage
WM_K30
-0.1
-0.0
+0.1
+0.1
+0.1
phage
WM_Bas31
+0.3
+0.2
-0.1
-0.2
+0.2
phage
WM_Bas31
-0.2
-0.0
+0.1
-0.0
+0.6
no phage control
Control_ECRC98_WM
+0.6
-0.0
-0.1
-0.1
+0.4
phage
WM_K30
+0.3
+0.2
+0.1
-0.1
+0.4
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