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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
lptB and ybhS overlap by 8 nucleotides
ybhS and ybhR are separated by 10 nucleotides
ybhR and ybhQ overlap by 39 nucleotides
ybhQ and ybhP are separated by 132 nucleotides
JDDGAC_09940: lptB - LPS export ABC transporter ATP-binding protein, at 1,772,655 to 1,774,391
lptB
JDDGAC_09945: ybhS - putative multidrug ABC transporter permease YbhS, at 1,774,384 to 1,775,517
ybhS
JDDGAC_09950: ybhR - putative multidrug ABC transporter permease YbhR, at 1,775,528 to 1,776,634
ybhR
JDDGAC_09955: ybhQ - Inner membrane protein YbhQ, at 1,776,596 to 1,777,006
ybhQ
JDDGAC_09960: ybhP - Uncharacterized protein YbhP, at 1,777,139 to 1,777,900
ybhP
Group
Condition
JDDGAC
_09940
JDDGAC
_09945
JDDGAC
_09950
JDDGAC
_09955
JDDGAC
_09960
lptB
ybhS
ybhR
ybhQ
ybhP
phage
WM_EV240
+0.1
-0.2
+0.1
-1.2
+0.2
no phage control
Control_ECRC98_WM
-0.1
-0.1
+0.0
-0.7
-0.0
phage
WM_Bas09
+0.2
-0.6
+0.5
-0.3
-0.4
phage
WM_TP12
-0.3
+0.1
-0.0
-0.1
-0.0
phage
WM_JK32
+0.1
-0.0
+0.2
-0.1
-0.4
phage
WM_K30
+0.1
-0.0
-0.0
-0.1
-0.0
phage
WM_TP12
+0.1
+0.1
+0.1
-0.2
-0.1
phage
WM_Bas31
+0.1
-0.3
+0.4
-0.2
-0.0
no phage control
Control_ECRC98_WM
+0.2
-0.1
+0.3
-0.4
-0.0
phage
WM_JK45
-0.1
-0.1
+0.4
+0.3
-0.2
phage
WM_JK32
-0.0
+0.1
+0.0
+0.2
-0.1
no phage control
Control_ECRC98_WM
-0.0
-0.1
+0.1
+0.1
+0.2
phage
WM_JK45
+0.0
+0.3
+0.3
+0.0
-0.2
phage
WM_K30
+0.1
-0.1
+0.1
+0.3
+0.2
phage
WM_Bas09
-0.2
+0.2
+0.4
-0.0
+0.2
phage
WM_EV240
+0.5
+0.2
+0.5
-0.3
-0.1
phage
WM_Bas31
+0.1
-0.0
+0.4
+0.3
+0.2
no phage control
Control_ECRC98_WM
+0.4
+0.1
+0.3
+0.6
-0.0
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