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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ycbJ and kdsB are separated by 153 nucleotides
kdsB and ycaR overlap by 4 nucleotides
ycaR and ycaQ are separated by 51 nucleotides
ycaQ and lpxK are separated by 36 nucleotides
JDDGAC_09040: ycbJ - Uncharacterized protein YcbJ, at 1,591,853 to 1,592,746
ycbJ
JDDGAC_09045: kdsB - 3-deoxy-manno-octulosonate cytidylyltransferase, at 1,592,900 to 1,593,646
kdsB
JDDGAC_09050: ycaR - protein YcaR, at 1,593,643 to 1,593,825
ycaR
JDDGAC_09055: ycaQ - Uncharacterized protein YcaQ, at 1,593,877 to 1,595,109
ycaQ
JDDGAC_09060: lpxK - tetraacyldisaccharide 4'-kinase, at 1,595,146 to 1,596,132
lpxK
Group
Condition
JDDGAC
_09040
JDDGAC
_09045
JDDGAC
_09050
JDDGAC
_09055
JDDGAC
_09060
ycbJ
kdsB
ycaR
ycaQ
lpxK
phage
WM_EV240
-0.4
N.D.
N.D.
-0.5
N.D.
phage
WM_Bas09
-0.6
N.D.
N.D.
-0.2
N.D.
no phage control
Control_ECRC98_WM
-0.3
N.D.
N.D.
-0.5
N.D.
no phage control
Control_ECRC98_WM
-0.2
N.D.
N.D.
-0.4
N.D.
phage
WM_TP12
-0.2
N.D.
N.D.
-0.3
N.D.
phage
WM_TP12
-0.3
N.D.
N.D.
-0.1
N.D.
phage
WM_K30
-0.2
N.D.
N.D.
-0.2
N.D.
phage
WM_Bas09
+0.1
N.D.
N.D.
-0.4
N.D.
phage
WM_JK45
-0.1
N.D.
N.D.
-0.2
N.D.
phage
WM_JK32
+0.2
N.D.
N.D.
-0.4
N.D.
phage
WM_EV240
+0.1
N.D.
N.D.
-0.2
N.D.
phage
WM_Bas31
+0.1
N.D.
N.D.
-0.2
N.D.
phage
WM_JK32
+0.0
N.D.
N.D.
-0.1
N.D.
phage
WM_JK45
-0.2
N.D.
N.D.
+0.2
N.D.
phage
WM_K30
+0.0
N.D.
N.D.
+0.0
N.D.
phage
WM_Bas31
+0.1
N.D.
N.D.
+0.0
N.D.
no phage control
Control_ECRC98_WM
+0.2
N.D.
N.D.
-0.0
N.D.
no phage control
Control_ECRC98_WM
+0.1
N.D.
N.D.
+0.2
N.D.
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