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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC98
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
fimC and fabG are separated by 145 nucleotides
fabG and cadC1 are separated by 687 nucleotides
cadC1 and JDDGAC_08135 are separated by 4 nucleotides
JDDGAC_08135 and eAL are separated by 101 nucleotides
JDDGAC_08120: fimC - P pilus assembly protein, chaperone PapD, at 1,414,143 to 1,414,832
fimC
JDDGAC_08125: fabG - oxidoreductase, at 1,414,978 to 1,415,760
fabG
JDDGAC_08130: cadC1 - transcriptional regulator, at 1,416,448 to 1,417,260
cadC1
JDDGAC_08135: JDDGAC_08135 - FidL, at 1,417,265 to 1,417,756
_08135
JDDGAC_08140: eAL - EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant), at 1,417,858 to 1,419,468
eAL
Group
Condition
JDDGAC
_08120
JDDGAC
_08125
JDDGAC
_08130
JDDGAC
_08135
JDDGAC
_08140
fimC
fabG
cadC1
eAL
phage
WM_TP15
+0.3
+0.3
-4.8
N.D.
-2.1
phage
WM_RB68
-0.1
+0.2
-3.7
N.D.
-1.8
phage
Bas36
+0.2
-0.7
-1.2
N.D.
-2.0
phage
WM_Bas68
-0.3
+0.0
-3.8
N.D.
+0.4
phage
WM_Bas09
+0.0
-0.7
-2.2
N.D.
-0.5
phage
WM_TP14
-0.0
-0.6
-3.0
N.D.
+0.3
phage
Bas61
-0.1
-0.7
-2.5
N.D.
+0.0
phage
WM_Bas41
-0.1
-0.1
-0.1
N.D.
-2.9
phage
Bas61
+0.1
-0.3
-2.6
N.D.
-0.3
phage
EV146
+0.2
-0.5
-0.4
N.D.
-2.3
phage
EV146
+0.0
-0.2
-2.8
N.D.
+0.2
phage
WM_TP5
+0.2
-0.6
-1.1
N.D.
-1.3
phage
WM_TP7
+0.8
+0.5
-4.2
N.D.
+0.2
phage
Lambda
-0.1
-0.4
-2.0
N.D.
+0.0
phage
WM_K30
+0.2
-0.6
-1.0
N.D.
-0.9
phage
Bas69
+0.1
-0.4
+0.6
N.D.
-2.5
phage
WM_TP7
+0.2
-1.3
+0.2
N.D.
-1.1
no phage control
Control_ECRC98_WM
+0.5
-0.3
-1.6
N.D.
-0.3
phage
GB_JK32
-0.5
+0.0
+0.8
N.D.
-1.7
phage
WM_TP2
-0.3
-1.0
+0.8
N.D.
-0.8
phage
WM_TP6
+0.0
-0.0
-2.2
N.D.
+1.1
phage
WM_TP12
-0.0
+0.2
-1.7
N.D.
+0.7
no phage control
Control_ECRC98_WM
+0.3
+0.2
+1.3
N.D.
-2.3
phage
WM_T2
-0.3
-0.7
+2.0
N.D.
-1.4
phage
WM_Bas69
+0.4
-0.6
+1.5
N.D.
-1.6
phage
GB_Bas36
-1.5
-1.0
+2.2
N.D.
+0.2
phage
TP9
+0.0
+0.3
+1.2
N.D.
-1.3
phage
Bas68
+0.2
-0.5
+1.8
N.D.
-0.7
no phage control
Control_ECRC98_WM
+0.3
-0.6
+1.6
N.D.
-0.0
phage
WM_RB68
-0.0
-0.5
+2.5
N.D.
-0.6
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